Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-858P-201ENST00000362436 107 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.187-201ENST00000363918 113 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.419-201ENST00000384041 102 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-622P-201ENST00000384272 103 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-790P-201ENST00000384479 105 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-310P-201ENST00000384655 107 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA48.7-201ENST00000391302 135 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RNA5SP390-201ENST00000410191 113 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AP000275.1-201ENST00000411943 390 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AC236972.1-201ENST00000433225 199 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.653-201ENST00000459091 95 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AC008571.1-201ENST00000467232 300 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RPL21P129-201ENST00000491732 478 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RPS27P26-201ENST00000494583 239 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 RNU5F-8P-201ENST00000515941 111 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA74D-201ENST00000516404 141 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 CKS1BP7-201ENST00000522230 235 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AP001836.1-201ENST00000604675 523 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 AL356157.2-201ENST00000605122 111 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 PISRT1.1-201ENST00000616930 107 ntBASIC2.84□□□□□ -1.95
TCRBV7S3A2A0A539 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TCRBV7S3A2A0A539 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.84□□□□□ -1.96
TCRBV7S3A2A0A539 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC093010.3-201ENST00000570269 15214 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-227P-201ENST00000362865 103 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.404-201ENST00000383978 102 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-43P-201ENST00000384302 107 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 RNU1-101P-201ENST00000391171 127 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.646-201ENST00000410980 101 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 RPL21P40-201ENST00000428586 483 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC006946.1-201ENST00000429106 328 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC097473.1-201ENST00000508142 408 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 ACA59.1-201ENST00000515966 143 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.701-201ENST00000516812 110 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 ZNF861P-201ENST00000588126 639 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 MIR3976-201ENST00000606807 139 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC024581.2-201ENST00000619986 252 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 MIR8057-201ENST00000620957 69 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC110079.1-202ENST00000635213 138 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC241585.2-209ENST00000638217 143 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC096644.4-201ENST00000563417 2912 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 MTND5P1-201ENST00000445440 1375 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 AC103988.1-201ENST00000566382 2177 ntBASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV7S3A2A0A539 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 SNORD56.1-201ENST00000362913 68 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1059P-201ENST00000363752 98 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 RNA5SP139-201ENST00000364340 117 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 SNORA18.3-201ENST00000384122 132 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 MIR767-201ENST00000390228 109 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 RNA5SP354-201ENST00000391247 136 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AL591034.2-201ENST00000402839 359 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 USMG5P1-201ENST00000425964 177 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC022018.1-201ENST00000430685 241 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AL139132.1-201ENST00000431587 344 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC004383.1-201ENST00000438135 289 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 MTCO3P10-201ENST00000455912 772 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC005741.1-201ENST00000511094 432 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 RNA5SP341-201ENST00000516261 117 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 SCARNA13-201ENST00000516672 275 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1213P-201ENST00000517075 94 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC107016.2-201ENST00000547968 190 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AL356055.1-201ENST00000602528 446 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 CYP2C61P-201ENST00000604072 290 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC019159.1-201ENST00000605094 187 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 AC133104.2-201ENST00000615272 193 ntBASIC2.82□□□□□ -1.96
TCRBV7S3A2A0A539 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms