Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC096725.1-201ENST00000514266 313 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC103996.1-201ENST00000555468 102 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 BNIP3P10-201ENST00000605360 577 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC064836.2-201ENST00000609491 462 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL137790.1-201ENST00000634283 177 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-859P-201ENST00000362728 107 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 SNORD114-19-201ENST00000363072 75 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 Y_RNA.135-201ENST00000363439 95 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-128P-201ENST00000383976 107 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-831P-201ENST00000384548 107 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 U6atac.2-201ENST00000408644 118 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-1140P-201ENST00000410517 106 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RN7SKP27-201ENST00000410684 333 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 VN1R36P-201ENST00000414936 291 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MTND1P23-201ENST00000416931 372 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RPL30P4-201ENST00000429309 333 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC092427.1-202ENST00000430569 476 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC243964.1-201ENST00000441814 261 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC080013.2-201ENST00000460866 323 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RPL31P58-201ENST00000469001 379 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC008628.2-201ENST00000502605 298 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MTCO2P30-201ENST00000503662 364 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC010186.2-204ENST00000537668 439 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MIR3944-201ENST00000581277 108 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL356280.1-201ENST00000603614 379 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 ELOCP5-201ENST00000604924 333 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC097372.5-201ENST00000623665 376 ntBASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MTND4P27-201ENST00000450813 1354 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC073346.2-201ENST00000624724 2058 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC002543.1-201ENST00000299783 1954 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC069528.2-201ENST00000624849 1991 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 Y_RNA.212-201ENST00000364177 102 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-214P-201ENST00000384130 107 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 SNORA41-201ENST00000384675 132 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MIR23B-201ENST00000384832 97 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL445529.1-201ENST00000398713 389 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL356776.1-201ENST00000406574 447 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU2-23P-201ENST00000410545 195 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-293P-201ENST00000411259 106 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL139413.1-201ENST00000421309 217 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 BX276092.3-201ENST00000424182 230 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 UBE2V1P4-201ENST00000425374 344 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 SNAP23P1-201ENST00000433229 246 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 SNORD109B-201ENST00000458961 67 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 SNORD109A-201ENST00000459128 67 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 snoU13.14-201ENST00000459372 104 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC096576.1-201ENST00000489014 359 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC018710.1-201ENST00000506509 158 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AK3P2-201ENST00000507976 429 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-864P-201ENST00000516256 108 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-1332P-201ENST00000516666 104 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-256P-201ENST00000516747 97 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC107953.1-201ENST00000522216 297 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MIR3199-1-201ENST00000582434 88 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MIR3117-201ENST00000584034 78 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 MIR3672-201ENST00000584290 82 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL138726.1-201ENST00000614873 333 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AL159153.1-201ENST00000619688 317 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 DUXAP9-208ENST00000622815 614 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 FO624990.1-201ENST00000636373 85 ntBASIC2.24□□□□□ -2.05
TRBV4-1A0A0J9YWV2 CASC19-280ENST00000642102 1351 ntBASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 Y_RNA.72-201ENST00000362894 103 ntBASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU1-72P-201ENST00000362976 153 ntBASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-1252P-201ENST00000363054 104 ntBASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNA5SP393-201ENST00000363423 117 ntBASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRBV4-1A0A0J9YWV2 RNU6-220P-201ENST00000390919 107 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms