Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-952P-201ENST00000391164 108 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 UBE2V1P10-201ENST00000414685 269 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 snoU13.30-201ENST00000458951 104 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 snoU13.27-201ENST00000459278 104 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-498P-201ENST00000459468 107 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 RPF2P2-201ENST00000504693 896 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 SNORA31.4-201ENST00000516049 129 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 SNORA31.19-201ENST00000517079 126 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AL442163.3-201ENST00000554110 156 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC136443.5-201ENST00000603741 370 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC243829.6-201ENST00000612652 106 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC092656.1-203ENST00000624134 423 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 AC120349.2-201ENST00000625002 298 ntBASIC0.18□□□□□ -2.38
TRAV1-2A0A0B4J238 OR4G2P-201ENST00000328113 903 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-858P-201ENST00000362436 107 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-1019P-201ENST00000364424 107 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 Y_RNA.363-201ENST00000365529 113 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-166P-201ENST00000384371 107 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-932P-201ENST00000391108 106 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 MTCO1P56-201ENST00000401674 224 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL359634.1-202ENST00000404721 284 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL357139.1-201ENST00000407792 426 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 RPL21P24-201ENST00000413752 448 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC027644.1-201ENST00000419595 298 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL121578.1-201ENST00000428051 892 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL035398.1-201ENST00000430869 322 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL008629.1-201ENST00000438615 184 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL606517.1-201ENST00000446914 387 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 MTND5P8-201ENST00000449817 1083 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 HMGB1P30-201ENST00000492455 606 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 SNORA31.2-201ENST00000516019 134 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 SNORD60.2-201ENST00000516883 86 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 CR383656.8-201ENST00000549046 145 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC091489.2-201ENST00000566263 604 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC069114.2-201ENST00000604699 304 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AP000654.2-201ENST00000605633 586 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-87P-201ENST00000607561 108 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC093913.1-201ENST00000614178 329 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 MTND4P21-201ENST00000453886 1357 ntBASIC0.17□□□□□ -2.38
TRAV1-2A0A0B4J238 OR4G1P-203ENST00000641984 1631 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-969P-201ENST00000383900 105 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-945P-201ENST00000383947 107 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 RNU6-14P-201ENST00000384630 106 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC123900.1-201ENST00000420390 96 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 RAC1P6-201ENST00000423911 575 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 NEFMP1-201ENST00000443423 1006 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC048334.1-201ENST00000477975 159 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC091163.3-201ENST00000518269 1144 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AP001189.2-201ENST00000527320 189 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC092451.2-201ENST00000538746 658 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC025678.1-201ENST00000567861 338 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC104984.5-201ENST00000586878 94 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AL159153.1-201ENST00000619688 317 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AL356094.1-201ENST00000624663 1212 ntBASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV1-2A0A0B4J238 AF228730.1-201ENST00000397972 663 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR942-201ENST00000401111 86 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 RAP1BP3-201ENST00000407180 549 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 AC016831.2-201ENST00000417179 352 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 MTCO2P12-201ENST00000427426 682 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 AL590623.1-201ENST00000427864 105 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 MTND4LP14-201ENST00000429447 288 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 FTH1P25-201ENST00000447665 469 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 RPL39P38-201ENST00000467018 153 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 FABP5P5-201ENST00000515537 406 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 RNA5SP134-201ENST00000516492 96 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 RNA5SP490-201ENST00000517141 136 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms