Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AL591043.1-201ENST00000432461 424 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC007969.2-201ENST00000441891 191 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL122001.1-201ENST00000457027 370 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MTCYBP40-201ENST00000509390 1135 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SCARNA24.1-201ENST00000516465 137 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-685P-201ENST00000517088 95 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR4255-201ENST00000579351 72 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC005771.1-201ENST00000585581 349 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC073539.2-201ENST00000597113 165 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 WISP1-OT1-201ENST00000602893 642 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL645939.4-201ENST00000604495 135 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC099842.1-201ENST00000619919 596 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC097372.5-201ENST00000623665 376 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC068787.1-201ENST00000623908 691 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR1248-201ENST00000629190 106 ntBASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-527P-201ENST00000363425 104 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-234P-201ENST00000365229 104 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 Y_RNA.576-201ENST00000384781 102 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-174P-201ENST00000410406 106 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RPS20P15-201ENST00000412792 311 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC009310.1-201ENST00000414414 451 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC011233.1-201ENST00000422812 283 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CBX3P6-201ENST00000430257 527 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MTATP6P16-201ENST00000434543 526 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL121890.1-201ENST00000435457 205 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 UBE2D3P4-201ENST00000441973 436 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNRPGP13-201ENST00000442212 177 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 TAF9P1-201ENST00000445421 515 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 TAF9P2-201ENST00000454958 515 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC116562.3-201ENST00000506136 177 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC009646.1-201ENST00000510455 318 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNORA3.4-201ENST00000515969 96 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC068587.5-201ENST00000528506 175 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC137800.2-201ENST00000574375 120 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR3908-201ENST00000579798 126 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC027449.1-201ENST00000608890 407 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC004223.4-201ENST00000612426 332 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC009159.2-201ENST00000617603 606 ntBASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-60P-201ENST00000364792 103 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-116P-201ENST00000384042 109 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR544A-201ENST00000384855 91 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC104850.1-201ENST00000435940 476 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RAP1BP2-201ENST00000478270 544 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC009977.1-201ENST00000586015 570 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC022022.2-201ENST00000602989 360 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC091304.9-201ENST00000612091 226 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL133173.2-201ENST00000614270 90 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC131159.1-201ENST00000621854 213 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC138649.3-201ENST00000622154 254 ntBASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.19□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MTND5P10-201ENST00000603719 1809 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-23P-201ENST00000363283 107 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU4-13P-201ENST00000364019 141 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU2-3P-201ENST00000410144 191 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 Y_RNA.598-201ENST00000410480 95 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-607P-201ENST00000411283 108 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MTND4P20-201ENST00000424125 869 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC087884.1-201ENST00000469738 328 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC104806.1-201ENST00000508720 308 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms