Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC093012.1-202ENST00000549403 582 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 AC060771.1-201ENST00000582031 164 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 SNORA4-201ENST00000584302 138 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 AC012557.2-201ENST00000605919 418 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 AC096586.1-201ENST00000610267 561 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 RMST_2.1-201ENST00000617263 136 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 LINC00216-201ENST00000623548 1126 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 AC004808.1-201ENST00000627671 721 ntBASIC-0.01□□□□□ -2.41
TRAV30A0A087WSZ9 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 RPL22P18-201ENST00000417197 377 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AL590556.1-201ENST00000423231 483 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AL606662.1-201ENST00000445763 553 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AC079140.3-201ENST00000511111 550 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AC010587.2-201ENST00000511727 448 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 SUMO2P18-201ENST00000518873 252 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 MIR4782-201ENST00000577987 79 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 Z98751.3-201ENST00000604447 521 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 RNU6-87P-201ENST00000607561 108 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 AC010487.4-201ENST00000637027 61 ntBASIC-0.02□□□□□ -2.41
TRAV30A0A087WSZ9 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 MIR518E-201ENST00000385252 88 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 MIR1287-201ENST00000408492 90 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 RNU2-70P-201ENST00000410718 179 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 ISCA1P1-201ENST00000426679 387 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 RAC1P8-201ENST00000427086 527 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 TXNL1P1-201ENST00000429528 554 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 DAP3P1-201ENST00000441522 278 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 RNU6-333P-201ENST00000459117 107 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AC013828.1-201ENST00000481845 158 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 RPS26P48-201ENST00000491713 339 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AC090615.1-201ENST00000577519 154 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 LARP7P1-201ENST00000605576 316 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 AL451064.1-201ENST00000607718 471 ntBASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.03□□□□□ -2.41
TRAV30A0A087WSZ9 MTND5P16-201ENST00000460269 1703 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 RNU4-45P-201ENST00000365469 141 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AF228730.1-201ENST00000397972 663 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 GTF2IP3-201ENST00000433887 494 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 SNORA62.5-201ENST00000516634 120 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 RNA5SP135-201ENST00000517019 125 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AC023932.2-201ENST00000603176 175 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AL356157.2-201ENST00000605122 111 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 AC100812.1-201ENST00000607622 580 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 MIR6515-201ENST00000619843 57 ntBASIC-0.04□□□□□ -2.42
TRAV30A0A087WSZ9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 RNA5SP264-201ENST00000363115 107 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 SNORD44.1-201ENST00000363202 61 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 SNORA63D-201ENST00000364359 132 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 RNU6-898P-201ENST00000365627 104 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 SNORA80D-201ENST00000384488 135 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 MIR32-201ENST00000384965 70 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 SNORD89-201ENST00000390981 114 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 CBX3P9-201ENST00000402326 552 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AL357139.1-201ENST00000407792 426 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 FABP5P4-201ENST00000437203 171 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AL031313.1-201ENST00000448435 256 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 RNA5SP436-201ENST00000516020 115 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 RNU6-885P-201ENST00000516607 104 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AP003327.1-201ENST00000529684 127 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 VN1R83P-201ENST00000595685 445 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 BNIP3P8-201ENST00000597863 560 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AP002906.1-201ENST00000603405 233 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 AL360219.1-201ENST00000610230 366 ntBASIC-0.05□□□□□ -2.42
TRAV30A0A087WSZ9 RNU6-252P-201ENST00000363232 107 ntBASIC-0.06□□□□□ -2.42
TRAV30A0A087WSZ9 RNU1-96P-201ENST00000364163 162 ntBASIC-0.06□□□□□ -2.42
TRAV30A0A087WSZ9 RNU4-67P-201ENST00000364569 141 ntBASIC-0.06□□□□□ -2.42
TRAV30A0A087WSZ9 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.06□□□□□ -2.42
TRAV30A0A087WSZ9 RPS3AP37-201ENST00000419176 745 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms