Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 RNA5SP446-201ENST00000515955 82 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-436P-201ENST00000516171 114 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU2-12P-201ENST00000517216 168 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 HMGN2P15-201ENST00000585707 270 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 AC011471.1-201ENST00000585766 187 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 SEPT7P4-201ENST00000437076 306 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 snoU13.28-201ENST00000459235 104 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.637-201ENST00000459424 114 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.797-201ENST00000515977 94 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 AP002001.1-203ENST00000534002 267 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 TGIF1P1-201ENST00000558095 802 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 AL078604.3-201ENST00000615580 211 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR6076-201ENST00000617521 113 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 AC091905.2-201ENST00000623143 306 ntBASIC4.41□□□□□ -1.7
PCDHGA11Q9Y5H2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.4□□□□□ -1.7
PCDHGA11Q9Y5H2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PCDHGA11Q9Y5H2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PCDHGA11Q9Y5H2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA11Q9Y5H2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA11Q9Y5H2 AL590240.1-201ENST00000334118 313 ntBASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP87-201ENST00000384155 118 ntBASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-131P-201ENST00000391144 107 ntBASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 AC100770.1-201ENST00000532310 322 ntBASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 SNORD11B-201ENST00000607707 90 ntBASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 PCGEM1.1-201ENST00000613431 131 ntBASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA11Q9Y5H2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AF117829.1-206ENST00000621883 3802 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 SNORD114-19-201ENST00000363072 75 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 Y_RNA.415-201ENST00000384012 112 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR550A3-201ENST00000390735 95 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-763P-201ENST00000390865 106 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-239P-201ENST00000390990 99 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-710P-201ENST00000410424 105 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RN7SKP167-201ENST00000411047 285 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC004552.1-201ENST00000419089 348 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RPL12P3-201ENST00000440080 396 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RPS26P3-201ENST00000470205 348 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RPS26P28-201ENST00000470806 348 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC090543.2-201ENST00000483963 348 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC004057.1-201ENST00000485827 348 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-344P-201ENST00000516635 111 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC136628.3-201ENST00000521868 290 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 TRAV8-5-201ENST00000537369 341 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR4436B2-201ENST00000581415 91 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 MIR4436B1-201ENST00000583272 91 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RPS15AP11-201ENST00000594193 385 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC091152.3-201ENST00000604227 325 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 TCL6_2.1-201ENST00000615162 119 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 Y_RNA.778-201ENST00000620203 90 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AC018692.3-201ENST00000623929 123 ntBASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA11Q9Y5H2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-1010P-201ENST00000362757 107 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 RNU6-275P-201ENST00000364910 107 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 AL357075.1-201ENST00000404107 726 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 AL591034.1-201ENST00000407447 340 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 EBAG9P1-201ENST00000418955 543 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 AC245291.1-201ENST00000419501 328 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 IGLV2-34-201ENST00000490007 283 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 EIF4A1P12-201ENST00000551910 141 ntBASIC4.38□□□□□ -1.71
PCDHGA11Q9Y5H2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms