Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 RNU5A-6P-201ENST00000384136 116 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 RNU6-39P-201ENST00000384344 107 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 RNU6-903P-201ENST00000391270 109 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 MTCO2P19-201ENST00000427513 598 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AC104850.1-201ENST00000435940 476 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AC012308.1-201ENST00000451232 178 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AC012507.3-201ENST00000603556 477 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AC087045.1-201ENST00000605856 382 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 UCA1.1-201ENST00000620952 75 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 SEPT14P19-203ENST00000633205 211 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
SHANK1Q9Y566 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.178-201ENST00000363832 102 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.201-201ENST00000364052 96 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.359-201ENST00000365498 102 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU4-48P-201ENST00000365559 182 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU6-456P-201ENST00000384493 107 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU2-29P-201ENST00000410423 189 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 EEF1A1P40-201ENST00000412883 573 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 BX682237.1-201ENST00000415016 335 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL365496.1-201ENST00000426885 215 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC022364.2-201ENST00000457963 554 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RPS29P15-201ENST00000458329 171 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC023194.1-201ENST00000493084 308 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU6-703P-201ENST00000516946 107 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 SCARNA3-201ENST00000517097 143 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 OR5B19P-201ENST00000531766 928 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC024614.2-201ENST00000577584 372 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC004223.2-201ENST00000590309 544 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 BNIP3P30-201ENST00000601184 574 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC012493.3-201ENST00000604494 112 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC136475.10-201ENST00000620253 385 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 CDC27P3-201ENST00000635418 1910 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU6-188P-201ENST00000364207 107 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU6-898P-201ENST00000365627 104 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNA5SP111-201ENST00000411386 101 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL160275.3-201ENST00000423876 471 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RPS15AP9-201ENST00000439856 381 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC073415.1-201ENST00000449240 153 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 PPP1R2P5-201ENST00000457256 603 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC107626.1-201ENST00000471084 183 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC022493.1-201ENST00000492984 337 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC105252.1-201ENST00000503089 286 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNU6-581P-201ENST00000516214 105 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 SCARNA24.1-201ENST00000516465 137 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.49□□□□□ -2.17
SHANK1Q9Y566 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AP001893.2-201ENST00000526949 202 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 AL161670.1-201ENST00000554348 137 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 Z84480.1-201ENST00000605131 311 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 MIR6840-201ENST00000611937 71 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 U6.114-201ENST00000636407 96 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 MTND5P26-201ENST00000426018 1752 ntBASIC1.49□□□□□ -2.17
SHANK1Q9Y566 RNY4P16-201ENST00000364768 94 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RNU6-166P-201ENST00000384371 107 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC023141.4-201ENST00000412031 328 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC079448.1-201ENST00000449377 373 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC091965.2-201ENST00000512324 613 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RNU6-928P-201ENST00000516876 104 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 RNA5SP364-201ENST00000516938 78 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC109329.1-201ENST00000518744 317 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC011604.1-201ENST00000545978 196 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 MIR3618-201ENST00000580330 88 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 MIR3611-201ENST00000584484 83 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AL449363.1-201ENST00000617815 186 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC048344.4-201ENST00000619744 527 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC011155.2-201ENST00000623202 216 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 AC099654.12-201ENST00000639868 649 ntBASIC1.48□□□□□ -2.17
SHANK1Q9Y566 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHANK1Q9Y566 MTND5P17-201ENST00000418405 1603 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms