Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RAP1BP3-201ENST00000407180 549 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AL139156.1-201ENST00000412785 841 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 CYCSP33-201ENST00000414485 327 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 HMGB1P29-201ENST00000505659 499 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC092436.1-201ENST00000506450 503 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC117522.2-201ENST00000510049 657 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 SMURF2P1-201ENST00000514992 481 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AP005435.4-201ENST00000529514 284 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC078795.2-201ENST00000602835 1252 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC073648.5-201ENST00000603502 305 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 RMST_7.1-201ENST00000621935 268 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 MIR3529-201ENST00000637713 78 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 ZNF680P1-201ENST00000436625 1469 ntBASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAPPC4Q9Y296 RBBP8P1-201ENST00000449447 1844 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-858P-201ENST00000362436 107 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 Y_RNA.51-201ENST00000362725 102 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1010P-201ENST00000362757 107 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNA5SP125-201ENST00000364843 120 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-622P-201ENST00000384272 103 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1119P-201ENST00000384349 108 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 Y_RNA.582-201ENST00000391023 95 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 SNORA46.1-201ENST00000391069 153 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AL133475.1-201ENST00000404414 305 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU2-9P-201ENST00000410194 145 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU2-2P-201ENST00000410396 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 PGBD4P6-201ENST00000421501 610 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 MTCO2P19-201ENST00000427513 598 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC124916.1-201ENST00000444020 547 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 MTND1P29-201ENST00000448112 647 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 MTCO2P18-201ENST00000457151 658 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC112771.1-201ENST00000463581 102 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AP001025.1-201ENST00000486139 332 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RPS29P21-201ENST00000496272 170 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 MTCO3P9-201ENST00000506989 781 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC105417.1-201ENST00000514691 285 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 SNORA43.2-201ENST00000516652 128 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RN7SKP219-201ENST00000516825 296 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 SNORA31.23-201ENST00000517219 133 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 NBR2-204ENST00000587322 63 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 BNIP3P30-201ENST00000601184 574 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AL391646.1-201ENST00000603860 190 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC021646.1-201ENST00000605469 484 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.15-201ENST00000611544 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.16-201ENST00000613119 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.12-201ENST00000613778 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.20-201ENST00000613956 192 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.9-201ENST00000615427 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.11-201ENST00000616345 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC009233.1-201ENST00000616477 371 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.2-201ENST00000616535 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.3-201ENST00000617785 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.19-201ENST00000618602 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 RNU2-1-201ENST00000618664 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.6-201ENST00000619225 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.5-201ENST00000619465 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 U2.10-201ENST00000620268 191 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AL162373.1-201ENST00000620433 407 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 AC131280.1-202ENST00000624067 4211 ntBASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRAPPC4Q9Y296 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
TRAPPC4Q9Y296 AL354685.2-201ENST00000448218 1447 ntBASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 RNU6-234P-201ENST00000365229 104 ntBASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 RNU5A-6P-201ENST00000384136 116 ntBASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 RNU6-1127P-201ENST00000384580 107 ntBASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 RNA5SP270-201ENST00000411361 118 ntBASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAPPC4Q9Y296 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms