Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC096920.1-201ENST00000423991 241 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 NDUFB1P2-201ENST00000449477 176 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 MTND1P27-201ENST00000451117 902 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 CKS1BP2-201ENST00000497342 240 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 ARL2BPP4-201ENST00000506854 471 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 RNU6-445P-201ENST00000516949 107 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC087883.1-201ENST00000551882 391 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 PSMA3P-201ENST00000555485 635 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC090897.2-201ENST00000581715 130 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC098848.2-201ENST00000588023 330 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AL670379.4-201ENST00000605279 254 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 AC022202.1-201ENST00000613515 211 ntBASIC2.13□□□□□ -2.07
SMC3Q9UQE7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 RNU6-858P-201ENST00000362436 107 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 RNA5SP276-201ENST00000362580 94 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 RNU6-179P-201ENST00000363350 107 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 Y_RNA.409-201ENST00000383990 98 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 RNU6-116P-201ENST00000384042 109 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 MIR561-201ENST00000385216 97 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 C8orf59P1-201ENST00000429930 303 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AL122001.1-201ENST00000457027 370 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC006512.1-201ENST00000468816 291 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC140059.1-201ENST00000489238 361 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC018868.1-201ENST00000491307 315 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC112206.3-201ENST00000514578 389 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 HSPE1P18-201ENST00000517602 280 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC107953.1-201ENST00000522216 297 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AP005639.2-201ENST00000527592 928 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 PIGPP4-201ENST00000584447 307 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AL138889.2-201ENST00000603883 242 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC025449.1-201ENST00000603896 529 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC087752.4-201ENST00000605911 462 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC096772.1-201ENST00000609146 564 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 AC099842.1-201ENST00000619919 596 ntBASIC2.12□□□□□ -2.07
SMC3Q9UQE7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMC3Q9UQE7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 Y_RNA.77-201ENST00000362962 107 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 Y_RNA.159-201ENST00000363674 87 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 SNORA25B-201ENST00000365507 128 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 RNU6-456P-201ENST00000384493 107 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 SNORA40.19-201ENST00000390846 128 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 RNU6-387P-201ENST00000411331 105 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 RNA5SP111-201ENST00000411386 101 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 EEF1A1P40-201ENST00000412883 573 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AL353193.1-201ENST00000421444 268 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AL445685.2-201ENST00000422551 342 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 MTCO2P11-201ENST00000431069 680 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC012308.1-201ENST00000451232 178 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 C1DP4-201ENST00000455429 424 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 ANXA2P1-201ENST00000505539 926 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC116562.3-201ENST00000506136 177 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 MTCO3P7-201ENST00000510008 774 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC068587.5-201ENST00000528506 175 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC007375.1-201ENST00000554513 578 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 SUB1P2-201ENST00000556401 297 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AC138649.3-201ENST00000622154 254 ntBASIC2.11□□□□□ -2.07
SMC3Q9UQE7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.11□□□□□ -2.07
SMC3Q9UQE7 FARSBP1-201ENST00000435808 1778 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 Y_RNA.41-201ENST00000362646 102 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 Y_RNA.318-201ENST00000365131 97 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 RNU6-1179P-201ENST00000384667 107 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 MIR10A-201ENST00000385043 110 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 RNU6-780P-201ENST00000391030 104 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 PGBD4P6-201ENST00000421501 610 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 VN1R108P-201ENST00000431580 830 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.1□□□□□ -2.07
SMC3Q9UQE7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.1□□□□□ -2.07
SMC3Q9UQE7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.1□□□□□ -2.07
SMC3Q9UQE7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.1□□□□□ -2.07
SMC3Q9UQE7 AC092436.1-201ENST00000506450 503 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 AC107393.1-201ENST00000512403 346 ntBASIC2.1□□□□□ -2.07
SMC3Q9UQE7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.1□□□□□ -2.07
SMC3Q9UQE7 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms