Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 MIR6817-201ENST00000615588 66 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 SNORA68.1-201ENST00000364537 132 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.529-201ENST00000384586 119 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 RNU6-658P-201ENST00000384606 106 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 MIR512-1-201ENST00000384913 84 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 MIR10A-201ENST00000385043 110 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 RNA5SP492-201ENST00000411330 114 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AC245054.2-201ENST00000415639 319 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 SNAP23P1-201ENST00000433229 246 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AL513043.1-201ENST00000439124 535 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AL359672.1-201ENST00000442302 409 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AMD1P1-201ENST00000457220 922 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 RPL7P43-201ENST00000478876 753 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 RPL39P5-202ENST00000512505 151 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.691-201ENST00000516611 103 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 RNU6-273P-201ENST00000516937 96 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AP002770.2-201ENST00000543613 532 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 MIR3672-201ENST00000584290 82 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 AC023043.2-201ENST00000589678 1026 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 C8orf59P2-201ENST00000603441 271 ntBASIC4.29□□□□□ -1.72
CDK11AQ9UQ88 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 MTND4P29-201ENST00000503122 1372 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.61-201ENST00000362835 102 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 SNORA67.4-201ENST00000384688 142 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 MIR887-201ENST00000401258 79 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 RPS15AP7-201ENST00000439294 405 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 RN7SKP43-201ENST00000516173 320 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 RNU6-566P-201ENST00000516790 107 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 OR1M4P-201ENST00000589199 287 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 RNU6-85P-201ENST00000605989 107 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 AL132765.2-201ENST00000610812 351 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 AL590808.1-201ENST00000618696 141 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 MIR3199-2-201ENST00000636243 86 ntBASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.28□□□□□ -1.72
CDK11AQ9UQ88 MTND5P19-201ENST00000424872 1794 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 RNU1-35P-201ENST00000362782 153 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 RNU6-384P-201ENST00000364900 104 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 SNORA51.4-201ENST00000364993 124 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 XGY1-201ENST00000381172 446 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 SNORD116-11-201ENST00000383882 92 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 Y_RNA.682-201ENST00000516457 100 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 RNU6-1332P-201ENST00000516666 104 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 RN7SKP40-201ENST00000517211 242 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 SCARNA11.3-201ENST00000517276 130 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 LINC00933-203ENST00000559812 219 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AC100830.2-201ENST00000581636 240 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AP000787.2-201ENST00000604432 568 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 APOOP1-201ENST00000604695 592 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AL138726.1-201ENST00000614873 333 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 MIR6715A-201ENST00000615929 79 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AL359697.1-201ENST00000624879 587 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AL133216.2-202ENST00000634512 349 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 AC092593.1-201ENST00000515413 1815 ntBASIC4.27□□□□□ -1.73
CDK11AQ9UQ88 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 Y_RNA.184-201ENST00000363884 108 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 RNU2-25P-201ENST00000411041 191 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC092427.1-202ENST00000430569 476 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 RPL21P2-201ENST00000440049 481 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC107399.1-201ENST00000451226 265 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 UQCRHP3-201ENST00000451503 251 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC008526.1-201ENST00000509149 338 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 VTRNA2-2P-201ENST00000516091 103 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 RNU6-1088P-201ENST00000516850 104 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 RNU6-1183P-201ENST00000517054 60 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 RNA5SP454-201ENST00000517231 127 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 COX6CP5-201ENST00000527162 228 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 HSPE1P20-201ENST00000538133 289 ntBASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK11AQ9UQ88 AC025423.5-201ENST00000550230 219 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms