Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM35Q9UPQ4 MIR5009-201ENST00000578736 100 ntBASIC5.9□□□□□ -1.46
TRIM35Q9UPQ4 AL138880.2-201ENST00000616214 239 ntBASIC5.9□□□□□ -1.46
TRIM35Q9UPQ4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
TRIM35Q9UPQ4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
TRIM35Q9UPQ4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM35Q9UPQ4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AL138820.1-201ENST00000617901 5305 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 Y_RNA.93-201ENST00000363066 109 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 RNY1P1-201ENST00000364372 112 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AC019205.3-201ENST00000424573 156 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AL358232.1-201ENST00000448030 501 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 NDUFS5P3-201ENST00000450668 321 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AC103975.1-201ENST00000482506 483 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 RNU6-365P-201ENST00000517113 106 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AP003357.1-201ENST00000604497 148 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 SNORD11B-201ENST00000607707 90 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AL021707.8-201ENST00000609428 183 ntBASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM35Q9UPQ4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 RNA5SP447-201ENST00000363749 119 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 SNORD87-201ENST00000364849 89 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 AP002088.1-201ENST00000382740 395 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 SNORD96B-201ENST00000386148 79 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 AF228730.3-201ENST00000436691 102 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 GEMIN8P3-201ENST00000445417 720 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 AC006463.2-201ENST00000473326 348 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 AC019288.1-201ENST00000557918 224 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 MIR3921-201ENST00000577308 85 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 AC005086.4-201ENST00000623065 213 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 OR51H2P-202ENST00000641424 3046 ntBASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM35Q9UPQ4 ASNSP1-201ENST00000518311 1939 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AC125336.1-201ENST00000508893 2827 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 MIR518C-201ENST00000384822 101 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 MIR624-201ENST00000385217 97 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 MIR208B-201ENST00000401172 77 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 MIR1271-201ENST00000408537 86 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AL356387.2-201ENST00000422272 243 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AC009220.1-201ENST00000451614 275 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AC012671.1-201ENST00000451912 203 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 RPS29P2-201ENST00000479278 136 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 RNU6-857P-201ENST00000515893 110 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 RNU6-904P-201ENST00000516206 101 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 CKS1BP7-201ENST00000522230 235 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 MIR4433B-201ENST00000581329 102 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AC097639.2-201ENST00000603159 172 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 IGLL4P-201ENST00000614590 133 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AC068205.3-201ENST00000636385 468 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 AC106871.1-201ENST00000568324 3102 ntBASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM35Q9UPQ4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 RNU6-497P-201ENST00000365316 104 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 U3.26-201ENST00000391236 204 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 RNU2-70P-201ENST00000410718 179 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 REREP1Y-201ENST00000422655 198 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 RPS12P10-201ENST00000427031 377 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 NIP7P2-201ENST00000485801 544 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 RNU6-344P-201ENST00000516635 111 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 SNORA31.23-201ENST00000517219 133 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 AC022790.1-201ENST00000522872 204 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 AC141557.1-201ENST00000540982 400 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 AC136601.2-201ENST00000604356 474 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 AL162713.1-201ENST00000604480 262 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.86□□□□□ -1.47
TRIM35Q9UPQ4 MIR3529-201ENST00000637713 78 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms