Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORD20-201ENST00000384550 80 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.518-201ENST00000384552 113 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 RNU5E-9P-201ENST00000411164 104 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AC004866.2-201ENST00000438285 481 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 EEF1B2P7-201ENST00000451177 676 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AC104057.1-201ENST00000515547 497 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AC010186.2-204ENST00000537668 439 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 PSMA6P4-201ENST00000603247 718 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AL355877.2-201ENST00000603670 358 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 U2.14-201ENST00000615943 113 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 AL359693.1-201ENST00000614959 2407 ntBASIC2.4□□□□□ -2.02
NOTCH3Q9UM47 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RNU6-1290P-201ENST00000362957 109 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RNU6-960P-201ENST00000364056 120 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RNU6-596P-201ENST00000365395 98 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 EEF1A1P41-201ENST00000414667 207 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AL590233.1-201ENST00000430017 456 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RPL36AP6-201ENST00000435770 321 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RPS23P5-201ENST00000495419 428 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AC092436.3-201ENST00000511788 257 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 RNU2-69P-201ENST00000516061 100 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.713-201ENST00000517013 96 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AC034114.1-201ENST00000520293 285 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 MRPS36P4-201ENST00000534436 298 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 H3F3AP1-201ENST00000559984 334 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 AL390123.1-201ENST00000603216 237 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NOTCH3Q9UM47 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.76-201ENST00000362931 109 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNY1P5-201ENST00000383890 115 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.581-201ENST00000391017 97 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU4-47P-201ENST00000410876 114 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC022018.1-201ENST00000430685 241 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AL513124.1-201ENST00000450410 614 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 snoU13.26-201ENST00000459452 105 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RBBP4P6-201ENST00000508098 202 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 ACA59.1-201ENST00000515966 143 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU1-41P-201ENST00000516161 162 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU1-48P-201ENST00000516400 162 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 MTND5P41-201ENST00000517498 206 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 NDUFB9P3-201ENST00000521269 501 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC100870.1-201ENST00000522035 505 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RANP3-201ENST00000530970 276 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 CBX3P4-201ENST00000538909 354 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 CR383656.7-201ENST00000548164 174 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC126177.3-201ENST00000551839 688 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AL442163.3-201ENST00000554110 156 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC020914.4-201ENST00000597690 277 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC002044.1-201ENST00000606707 158 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AL590240.4-201ENST00000616908 390 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC000403.1-201ENST00000613696 3585 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AL513302.2-201ENST00000562313 1842 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.81-201ENST00000362997 102 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.143-201ENST00000363520 106 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.199-201ENST00000364014 102 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 SNORD51-201ENST00000384320 80 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU6-306P-201ENST00000384617 107 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU2-15P-201ENST00000410692 191 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RPL23AP22-201ENST00000437556 453 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms