Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC007389.2-201ENST00000434630 306 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AL031659.1-201ENST00000447075 539 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AL590664.1-201ENST00000448065 339 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC125238.1-201ENST00000448842 249 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AL353705.4-201ENST00000449661 238 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC098869.1-201ENST00000481627 292 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 RPL23AP75-201ENST00000491601 451 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 RN7SKP272-201ENST00000516988 232 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC090617.3-201ENST00000573670 475 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 MIR4425-201ENST00000580572 84 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 SCARNA4-201ENST00000629045 128 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC092435.3-201ENST00000565538 3654 ntBASIC4.58□□□□□ -1.68
BRPF3Q9ULD4 AC007656.2-201ENST00000624902 4547 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 SNORA20.1-201ENST00000364790 130 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 RNU6-213P-201ENST00000384051 104 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 RNU6-1035P-201ENST00000384477 107 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 AC091286.1-201ENST00000431233 461 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 AC009296.1-201ENST00000443146 155 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 RN7SKP21-201ENST00000516503 220 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 RNU6-928P-201ENST00000516876 104 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 MIR3609-201ENST00000582661 80 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 AC073410.2-201ENST00000603240 332 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 AL591424.2-201ENST00000617023 128 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 AC024581.2-201ENST00000619986 252 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 SDR42E1P4-201ENST00000620894 481 ntBASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
BRPF3Q9ULD4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 Y_RNA.439-201ENST00000384119 94 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 RPL30P14-201ENST00000482744 348 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 RPS27AP10-201ENST00000496103 208 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 AC110768.1-201ENST00000509222 400 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 AC093023.1-201ENST00000547375 507 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 AC120057.2-201ENST00000571520 271 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 MIR4697-201ENST00000582977 78 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 RPL23AP88-201ENST00000605759 454 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 AC141273.2-201ENST00000618989 130 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 AC068724.3-201ENST00000625906 87 ntBASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BRPF3Q9ULD4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 SNORD56.1-201ENST00000362913 68 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 RNU6-283P-201ENST00000364788 107 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AP002088.1-201ENST00000382740 395 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 RNU6-1286P-201ENST00000383871 107 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 RNU2-25P-201ENST00000411041 191 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AP000907.1-201ENST00000428428 510 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 MTND4LP30-201ENST00000454092 297 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AC006483.1-201ENST00000487308 313 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 RPL30P1-201ENST00000488676 339 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AC091874.1-201ENST00000511402 339 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AC090877.1-201ENST00000561418 344 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 RN7SL703P-201ENST00000578485 302 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 AL451007.1-201ENST00000595491 289 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 MIR6875-201ENST00000617506 72 ntBASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BRPF3Q9ULD4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 Y_RNA.84-201ENST00000363011 104 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 RNU6-17P-201ENST00000384245 107 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 RNU6-18P-201ENST00000384527 107 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 RNU6-1203P-201ENST00000410703 110 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 AC139712.2-201ENST00000424302 339 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 GOT2P5-201ENST00000433995 546 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 BX679664.1-201ENST00000434429 253 ntBASIC4.54□□□□□ -1.68
BRPF3Q9ULD4 RPS29P20-201ENST00000489592 171 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms