Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AL133217.1-201ENST00000450980 425 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 IGKV3-31-201ENST00000523109 329 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 OR5AL2P-201ENST00000532185 920 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 MIR3915-201ENST00000578518 97 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 MIR3136-201ENST00000583498 78 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 AC018889.1-201ENST00000605372 397 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CHRNA9Q9UGM1 AL354685.2-201ENST00000448218 1447 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 RNU4-21P-201ENST00000362802 126 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 Y_RNA.324-201ENST00000365165 102 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 RNU4-48P-201ENST00000365559 182 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 RNU6-116P-201ENST00000384042 109 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 TRAV32-201ENST00000553993 340 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 AC103987.3-201ENST00000582071 292 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 BNIP3P16-201ENST00000589779 534 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 AL078605.1-201ENST00000603529 500 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 AC109347.2-201ENST00000610220 349 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 YWHAEP7-203ENST00000622054 312 ntBASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.84□□□□□ -2.11
CHRNA9Q9UGM1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
CHRNA9Q9UGM1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CHRNA9Q9UGM1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AL139156.1-201ENST00000412785 841 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 IFNA20P-201ENST00000436840 528 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AL353752.1-201ENST00000454946 260 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AC112492.4-201ENST00000456549 352 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-377P-201ENST00000515965 102 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 RNA5SP503-201ENST00000517047 117 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-1220P-201ENST00000517126 108 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 COPS8P3-201ENST00000526024 482 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AP000889.1-201ENST00000530968 660 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AP002453.2-201ENST00000533503 320 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 MIR548AB-201ENST00000584917 84 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 CLIC4P2-201ENST00000601934 717 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 CYP2C61P-201ENST00000604072 290 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 AC110994.2-201ENST00000635481 492 ntBASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CHRNA9Q9UGM1 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-1285P-201ENST00000363480 105 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-105P-201ENST00000363909 104 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-434P-201ENST00000384376 107 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-606P-201ENST00000384721 111 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNY3P10-201ENST00000384764 102 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RPL30P12-201ENST00000474666 353 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 TRBV12-1-201ENST00000479785 344 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 HMGB3P17-201ENST00000504195 649 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 RNU6-759P-201ENST00000516740 103 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 HSPE1P18-201ENST00000517602 280 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AP001893.2-201ENST00000526949 202 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AP005435.4-201ENST00000529514 284 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 AC023050.3-201ENST00000541142 333 ntBASIC1.82□□□□□ -2.12
CHRNA9Q9UGM1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms