Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC099654.14-201ENST00000638599 341 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNU6-461P-201ENST00000364195 107 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP35Q9P2H5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.08□□□□□ -1.76
USP35Q9P2H5 MIR887-201ENST00000401258 79 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 RNU6-1148P-201ENST00000410992 104 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.08□□□□□ -1.76
USP35Q9P2H5 UQCRHP3-201ENST00000451503 251 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 AK3P2-201ENST00000507976 429 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 RNU6-864P-201ENST00000516256 108 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 AP000889.2-201ENST00000532684 490 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 AC105137.2-201ENST00000569073 466 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 AC103810.1-201ENST00000579873 453 ntBASIC4.08□□□□□ -1.76
USP35Q9P2H5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.08□□□□□ -1.76
USP35Q9P2H5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP35Q9P2H5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP35Q9P2H5 RNU6-428P-201ENST00000362942 107 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP35Q9P2H5 SNORD73A-201ENST00000386062 65 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 MT-TL1-201ENST00000386347 75 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
USP35Q9P2H5 MTCO3P46-201ENST00000425787 232 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 CST9LP2-201ENST00000437612 320 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 EEF1B2P7-201ENST00000451177 676 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.07□□□□□ -1.76
USP35Q9P2H5 MTCO2P30-201ENST00000503662 364 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 YWHAEP4-201ENST00000505390 198 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.07□□□□□ -1.76
USP35Q9P2H5 SCGB1D5P-201ENST00000515134 247 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 RNU6-1332P-201ENST00000516666 104 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 SCARNA3-201ENST00000517097 143 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 AC087241.2-201ENST00000535801 324 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 AC026371.1-201ENST00000551867 419 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.07□□□□□ -1.76
USP35Q9P2H5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP35Q9P2H5 AC069234.5-201ENST00000611056 416 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 AC002543.1-201ENST00000299783 1954 ntBASIC4.07□□□□□ -1.76
USP35Q9P2H5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC4.07□□□□□ -1.76
USP35Q9P2H5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.06□□□□□ -1.76
USP35Q9P2H5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP35Q9P2H5 Z75746.1-201ENST00000440243 2080 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 Y_RNA.135-201ENST00000363439 95 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 RNU6-831P-201ENST00000384548 107 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 U6atac.2-201ENST00000408644 118 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC118273.2-201ENST00000532092 465 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC103996.1-201ENST00000555468 102 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC138761.3-201ENST00000579993 334 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC011712.1-201ENST00000588959 234 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC023043.2-201ENST00000589678 1026 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 ELOCP5-201ENST00000604924 333 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AL356157.2-201ENST00000605122 111 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AL138726.1-201ENST00000614873 333 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC009248.2-201ENST00000619826 254 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC007792.1-201ENST00000623023 402 ntBASIC4.06□□□□□ -1.76
USP35Q9P2H5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP35Q9P2H5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP35Q9P2H5 AC080128.1-201ENST00000474389 1917 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP35Q9P2H5 Y_RNA.279-201ENST00000364763 95 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 SET-203ENST00000372688 801 ntTSL 2 BASIC4.05□□□□□ -1.76
USP35Q9P2H5 AL133475.1-201ENST00000404414 305 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 RNU2-23P-201ENST00000410545 195 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 AC138623.1-201ENST00000418060 216 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 BX276092.3-201ENST00000424182 230 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 AL645568.3-201ENST00000433683 316 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 AL121890.1-201ENST00000435457 205 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 AC080013.2-201ENST00000460866 323 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 AC092436.3-201ENST00000511788 257 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 RNU6-56P-201ENST00000516986 93 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.05□□□□□ -1.76
USP35Q9P2H5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP35Q9P2H5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.05□□□□□ -1.76
USP35Q9P2H5 AC064836.2-201ENST00000609491 462 ntBASIC4.05□□□□□ -1.76
USP35Q9P2H5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.05□□□□□ -1.76
USP35Q9P2H5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP35Q9P2H5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.04□□□□□ -1.76
USP35Q9P2H5 OR56A5-201ENST00000340110 738 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.04□□□□□ -1.76
USP35Q9P2H5 RNU6-876P-201ENST00000391295 104 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP35Q9P2H5 RNU6-293P-201ENST00000411259 106 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 IFNA20P-201ENST00000436840 528 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP35Q9P2H5 MTND4LP16-201ENST00000440828 295 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 RPL7P12-201ENST00000446719 750 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 AC112771.1-201ENST00000463581 102 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 AC116353.2-201ENST00000505332 712 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 AC046134.1-201ENST00000514454 666 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 AC107953.1-201ENST00000522216 297 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
USP35Q9P2H5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.04□□□□□ -1.76
USP35Q9P2H5 MIR3672-201ENST00000584290 82 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.04□□□□□ -1.76
USP35Q9P2H5 AC093010.3-201ENST00000570269 15214 ntBASIC4.04□□□□□ -1.76
USP35Q9P2H5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms