Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.92□□□□□ -2.1
HPF1Q9NWY4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.92□□□□□ -2.1
HPF1Q9NWY4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.92□□□□□ -2.1
HPF1Q9NWY4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.92□□□□□ -2.1
HPF1Q9NWY4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.92□□□□□ -2.1
HPF1Q9NWY4 AC104984.5-201ENST00000586878 94 ntBASIC1.92□□□□□ -2.1
HPF1Q9NWY4 AC131159.1-201ENST00000621854 213 ntBASIC1.92□□□□□ -2.1
HPF1Q9NWY4 MIR1248-201ENST00000629190 106 ntBASIC1.92□□□□□ -2.1
HPF1Q9NWY4 MTND4P4-201ENST00000439033 1366 ntBASIC1.92□□□□□ -2.1
HPF1Q9NWY4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 RNU6-45P-201ENST00000384471 107 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 RNU6-160P-201ENST00000384591 107 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 RNU2-3P-201ENST00000410144 191 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 RNU6-1129P-201ENST00000515964 104 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC087883.1-201ENST00000551882 391 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC024933.1-201ENST00000608472 348 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 MIR6715A-201ENST00000615929 79 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC097372.5-201ENST00000623665 376 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 Z69720.2-201ENST00000624755 279 ntBASIC1.91□□□□□ -2.1
HPF1Q9NWY4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HPF1Q9NWY4 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.1
HPF1Q9NWY4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RNU6-1287P-201ENST00000362914 107 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RNU6-23P-201ENST00000363283 107 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 SNORA62.1-201ENST00000364287 154 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RNY4P34-201ENST00000364779 95 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RNU6-1060P-201ENST00000384664 107 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 MIR1294-201ENST00000408503 142 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 SNORD56-201ENST00000413522 71 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AL591719.1-201ENST00000444669 744 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC079781.2-201ENST00000446424 169 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC087884.1-201ENST00000469738 328 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RPL38P4-201ENST00000502376 214 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC104136.1-201ENST00000512969 394 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC009094.1-201ENST00000564443 426 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 MIR3198-2-201ENST00000577868 80 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC103987.3-201ENST00000582071 292 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 MIR548AB-201ENST00000584917 84 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AL158827.2-201ENST00000602494 330 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC090578.1-201ENST00000604955 591 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC103810.8-201ENST00000607347 118 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AC130454.1-201ENST00000622948 401 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 AL691447.3-201ENST00000635020 330 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 U4.7-201ENST00000638126 106 ntBASIC1.9□□□□□ -2.11
HPF1Q9NWY4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
HPF1Q9NWY4 CBX3P1-201ENST00000325243 554 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 U8.3-201ENST00000363321 132 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 Y_RNA.367-201ENST00000365544 101 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 Y_RNA.560-201ENST00000384689 102 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AL079342.1-201ENST00000401460 267 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 RPS3AP3-201ENST00000411933 242 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 CYCSP33-201ENST00000414485 327 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC013410.2-201ENST00000422627 201 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AL451074.3-201ENST00000437709 472 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC009646.1-201ENST00000510455 318 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC090572.1-201ENST00000519251 160 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC106038.2-201ENST00000520706 568 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 HSBP1P1-201ENST00000555205 166 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 AC098848.2-201ENST00000588023 330 ntBASIC1.89□□□□□ -2.11
HPF1Q9NWY4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
HPF1Q9NWY4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HPF1Q9NWY4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HPF1Q9NWY4 RNU6-105P-201ENST00000363909 104 ntBASIC1.88□□□□□ -2.11
HPF1Q9NWY4 SNORA48.1-201ENST00000390879 135 ntBASIC1.88□□□□□ -2.11
HPF1Q9NWY4 RNU6-550P-201ENST00000391057 101 ntBASIC1.88□□□□□ -2.11
HPF1Q9NWY4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.88□□□□□ -2.11
HPF1Q9NWY4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
HPF1Q9NWY4 GPR143P-201ENST00000434155 205 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 669.9 ms