Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AC137800.2-201ENST00000574375 120 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 WISP1-OT1-201ENST00000602893 642 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AC138649.3-201ENST00000622154 254 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 RNU6-116P-201ENST00000384042 109 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 Y_RNA.576-201ENST00000384781 102 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 MIR544A-201ENST00000384855 91 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 Y_RNA.598-201ENST00000410480 95 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC011233.1-201ENST00000422812 283 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC007969.2-201ENST00000441891 191 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 TAF9P1-201ENST00000445421 515 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 TAF9P2-201ENST00000454958 515 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC010486.1-201ENST00000511793 424 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC009977.1-201ENST00000586015 570 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC073539.2-201ENST00000597113 165 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC022022.2-201ENST00000602989 360 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AL133173.2-201ENST00000614270 90 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC009159.2-201ENST00000617603 606 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 AC097372.5-201ENST00000623665 376 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 MIR1248-201ENST00000629190 106 ntBASIC1.46□□□□□ -2.18
CLN6Q9NWW5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLN6Q9NWW5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AL356292.1-201ENST00000283110 373 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 RNU6-23P-201ENST00000363283 107 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 MIR583-201ENST00000384846 75 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 RNU6-1245P-201ENST00000411130 106 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC104850.1-201ENST00000435940 476 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AL360221.1-201ENST00000445989 335 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC092436.1-201ENST00000506450 503 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC104806.1-201ENST00000508720 308 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC009646.1-201ENST00000510455 318 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AP001893.2-201ENST00000526949 202 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 MIR3198-2-201ENST00000577868 80 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AL022161.1-201ENST00000604390 213 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AP000654.2-201ENST00000605633 586 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC091304.9-201ENST00000612091 226 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC131159.1-201ENST00000621854 213 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 AC130454.1-201ENST00000622948 401 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 U6.114-201ENST00000636407 96 ntBASIC1.45□□□□□ -2.18
CLN6Q9NWW5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.45□□□□□ -2.18
CLN6Q9NWW5 MIR126-201ENST00000362291 85 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 RNU6-1222P-201ENST00000384615 107 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 SNORA40.18-201ENST00000391200 128 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 RNU6-607P-201ENST00000411283 108 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 OR6C66P-201ENST00000414917 930 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 MTND4P20-201ENST00000424125 869 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 MTND5P25-201ENST00000430499 799 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 RAP1BP2-201ENST00000478270 544 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC027575.1-201ENST00000481064 460 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC074344.1-201ENST00000512823 224 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 FABP5P5-201ENST00000515537 406 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 Vault.3-201ENST00000516676 95 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC115990.1-201ENST00000526957 301 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC011458.1-201ENST00000604034 617 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC010900.2-201ENST00000604508 210 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
CLN6Q9NWW5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CLN6Q9NWW5 CBX3P1-201ENST00000325243 554 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 SNORD115-7-201ENST00000365306 82 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 RNU6-169P-201ENST00000365336 107 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 RNU6-45P-201ENST00000384471 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms