Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC109479.2-201ENST00000517842 174 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 CASP1P1-201ENST00000526345 212 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AC106785.1-201ENST00000565935 262 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.36□□□□□ -1.87
PARPBPQ9NWS1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC090740.1-201ENST00000623193 2262 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 SNORD81.1-201ENST00000363064 77 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 SNORD113-8-201ENST00000363497 74 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RNU5E-7P-201ENST00000365290 117 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 MTCYBP2-201ENST00000407745 171 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC104332.1-201ENST00000440471 797 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 CYCSP32-201ENST00000440548 321 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AL078601.1-201ENST00000444542 271 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 snoU13.24-201ENST00000458998 104 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC107393.1-201ENST00000512403 346 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC010265.1-201ENST00000513509 211 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RNU7-175P-201ENST00000515915 61 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RNU6-496P-201ENST00000516145 99 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 SNORA70.16-201ENST00000516390 95 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RN7SKP209-201ENST00000516888 304 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 SNORA31.18-201ENST00000517043 134 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC022868.1-201ENST00000517767 391 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 MIR4659A-201ENST00000580269 81 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 MIR3133-201ENST00000583157 78 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AL645944.1-201ENST00000603857 493 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 BX284668.6-201ENST00000606899 438 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 AL161912.2-201ENST00000565707 3007 ntBASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PARPBPQ9NWS1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 RNU6-1301P-201ENST00000362724 104 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 SNORA7.2-201ENST00000364446 145 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 RNU6-926P-201ENST00000384075 107 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AC017079.2-201ENST00000416102 485 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AL358453.1-201ENST00000422522 250 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AC007389.2-201ENST00000434630 306 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AL133162.1-201ENST00000463228 453 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 RPS26P21-201ENST00000475397 348 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AC010186.2-204ENST00000537668 439 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 AC127459.3-201ENST00000624328 466 ntBASIC3.34□□□□□ -1.87
PARPBPQ9NWS1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PARPBPQ9NWS1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PARPBPQ9NWS1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PARPBPQ9NWS1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 Z98749.2-208ENST00000381646 500 ntBASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 RNU6-72P-201ENST00000384285 79 ntBASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 MIR34A-201ENST00000385130 110 ntBASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.33□□□□□ -1.88
PARPBPQ9NWS1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms