Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AP001025.1-201ENST00000486139 332 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC015911.1-201ENST00000495111 156 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC097462.2-201ENST00000504623 481 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 SNORD19.2-201ENST00000516978 73 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 GNAI2P1-201ENST00000541815 315 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC025281.1-201ENST00000567026 265 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC006600.1-201ENST00000572529 153 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 MIR5701-3-201ENST00000578890 82 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 MIR5701-1-201ENST00000585138 82 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 MIR5701-2-201ENST00000615634 82 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL132822.1-201ENST00000617063 513 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL606534.2-204ENST00000635008 178 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AL353746.1-201ENST00000566293 6881 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 AC008669.1-201ENST00000565823 2178 ntBASIC3.17□□□□□ -1.9
RLIMQ9NVW2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RLIMQ9NVW2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 SNORD32A-201ENST00000364805 84 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.389-201ENST00000383924 113 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.405-201ENST00000383979 100 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.451-201ENST00000384200 100 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.524-201ENST00000384564 100 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Y_RNA.561-201ENST00000384694 100 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 MIR591-201ENST00000385290 95 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 RNA5SP354-201ENST00000391247 136 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AL356968.1-201ENST00000416622 474 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 CYCSP4-201ENST00000429682 331 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 Z82188.1-201ENST00000436709 154 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 SETP5-201ENST00000437270 562 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 GPM6BP3-201ENST00000442797 145 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 RN7SKP210-201ENST00000459176 261 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AC104564.1-201ENST00000493028 407 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 RPL7P47-201ENST00000497299 556 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 GZMAP1-201ENST00000503054 631 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 RNU6-764P-201ENST00000516396 105 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AC090897.2-201ENST00000581715 130 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 SNORD58B-201ENST00000607313 66 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.16□□□□□ -1.9
RLIMQ9NVW2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RLIMQ9NVW2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.15□□□□□ -1.9
RLIMQ9NVW2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RLIMQ9NVW2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 RNU1-105P-201ENST00000363470 161 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 SNORA14A-201ENST00000364773 135 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.424-201ENST00000384063 103 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 RNU6-748P-201ENST00000384648 107 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 MIR628-201ENST00000385229 95 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 RN7SKP202-201ENST00000410439 330 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 CHEK2P4-201ENST00000450340 246 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 MTND5P22-201ENST00000458380 195 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 MTATP8P1-201ENST00000467115 207 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 RPL30P10-201ENST00000488148 337 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 Y_RNA.706-201ENST00000516933 99 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 RNU1-45P-201ENST00000517191 141 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC144568.1-201ENST00000520139 137 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 MIR4272-201ENST00000635924 64 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 MIR7153-201ENST00000637758 57 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AC009093.8-201ENST00000641769 292 ntBASIC3.15□□□□□ -1.91
RLIMQ9NVW2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RLIMQ9NVW2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RNU6-212P-201ENST00000362642 104 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RNA5SP197-201ENST00000363357 119 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.14□□□□□ -1.91
RLIMQ9NVW2 RNU6-142P-201ENST00000384019 107 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 SNORA69.1-201ENST00000390904 137 ntBASIC3.14□□□□□ -1.91
RLIMQ9NVW2 SNORA12.2-201ENST00000391040 156 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms