Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RPL36AP48-201ENST00000485521 314 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC092436.3-201ENST00000511788 257 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC046134.1-201ENST00000514454 666 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 RNA5SP112-201ENST00000515937 99 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC079598.5-201ENST00000547460 117 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC009314.1-201ENST00000603871 304 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC024581.2-201ENST00000619986 252 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 MIR7157-201ENST00000635801 60 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC092593.1-201ENST00000515413 1815 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC6A13Q9NSD5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-1010P-201ENST00000362757 107 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-486P-201ENST00000363116 107 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 Y_RNA.212-201ENST00000364177 102 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 SNORA9.2-201ENST00000365361 133 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-767P-201ENST00000384132 107 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-293P-201ENST00000411259 106 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 MTND3P10-201ENST00000450967 341 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-1037P-201ENST00000459571 107 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-329P-201ENST00000459618 107 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AC112771.1-201ENST00000463581 102 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AC097462.2-201ENST00000504623 481 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AC008526.1-201ENST00000509149 338 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 COX6CP5-201ENST00000527162 228 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 MIR4742-201ENST00000581069 85 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AL022345.1-201ENST00000607292 135 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A13Q9NSD5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-562P-201ENST00000362731 107 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 Y_RNA.88-201ENST00000363029 99 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 SNORD114-19-201ENST00000363072 75 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 Y_RNA.111-201ENST00000363248 100 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 SNORD116-11-201ENST00000383882 92 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 MTND3P8-201ENST00000412909 339 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC138623.1-201ENST00000418060 216 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC097463.2-201ENST00000421074 142 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC243964.1-201ENST00000441814 261 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 PMCHL2-203ENST00000457791 237 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AIG1P1-201ENST00000503376 148 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 SNORA31.18-201ENST00000517043 134 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC109329.1-201ENST00000518744 317 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC243972.3-201ENST00000539655 198 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 TRAV32-201ENST00000553993 340 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 SCOCP1-201ENST00000554676 349 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AC105137.2-201ENST00000569073 466 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 MIR4325-201ENST00000583049 90 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 Z75746.1-201ENST00000440243 2080 ntBASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A13Q9NSD5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 MTND4P23-201ENST00000447723 1363 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-845P-201ENST00000362578 103 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 Y_RNA.166-201ENST00000363730 102 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 RNU1-140P-201ENST00000365040 165 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 RNU2-23P-201ENST00000410545 195 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 SNAP23P1-201ENST00000433229 246 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AL645568.3-201ENST00000433683 316 ntBASIC2.66□□□□□ -1.98
SLC6A13Q9NSD5 AC098614.3-201ENST00000438957 440 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms