Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR8065-201ENST00000620577 100 ntBASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC0.54□□□□□ -2.32
CDC42SE1Q9NRR8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNU1-36P-201ENST00000365130 165 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNA5SP88-201ENST00000365560 109 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-142P-201ENST00000384019 107 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA64-201ENST00000384674 134 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MIR100-201ENST00000385259 80 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 UBE2V1P2-201ENST00000397758 440 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MIR1323-201ENST00000408090 73 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNU4-22P-201ENST00000411058 166 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC006461.1-201ENST00000412637 326 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC004965.1-201ENST00000413033 213 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MTCO3P41-201ENST00000414801 328 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC114491.1-201ENST00000416095 246 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MTCO1P21-201ENST00000416634 589 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 POLR2J4-204ENST00000418424 324 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 EBAG9P1-201ENST00000418955 543 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RPS3AP37-201ENST00000419176 745 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 SNX2P2-201ENST00000424553 323 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 EEF1A1P39-201ENST00000440791 250 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RPS4XP11-201ENST00000446897 772 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 TOMM22P6-201ENST00000465035 409 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MTND3P5-201ENST00000512798 333 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNA5SP182-201ENST00000516064 82 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-123P-201ENST00000516163 102 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 SCARNA16.2-201ENST00000516520 172 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-165P-201ENST00000517170 99 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC103987.3-201ENST00000582071 292 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MIR4661-201ENST00000582720 75 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MIR4325-201ENST00000583049 90 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AL022345.2-201ENST00000606307 135 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 BX284668.6-201ENST00000606899 438 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AC026585.1-201ENST00000619582 524 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 AL137790.1-201ENST00000634283 177 ntBASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CDC42SE1Q9NRR8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 ZNF209P-201ENST00000593450 2304 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 RNU4-1-201ENST00000363925 141 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 RN7SKP227-201ENST00000364445 330 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA32.2-201ENST00000384049 122 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 RNU2-3P-201ENST00000410144 191 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 RNA5SP201-201ENST00000410316 124 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 RNA5SP184-201ENST00000411071 108 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 PIGFP2-201ENST00000421400 651 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 RPL7P54-201ENST00000438336 674 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 ATP5J2P3-201ENST00000451550 258 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC016925.1-201ENST00000458303 298 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 snoU13.27-201ENST00000459278 104 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC007547.1-201ENST00000462177 490 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC010531.2-201ENST00000465012 153 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC104564.1-201ENST00000493028 407 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 MTCYBP18-201ENST00000501056 747 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA26.10-201ENST00000516427 141 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 CYCSP23-201ENST00000519781 313 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AL442163.3-201ENST00000554110 156 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC008088.1-201ENST00000580993 280 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 MIR4653-201ENST00000585107 83 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC012507.3-201ENST00000603556 477 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AL391646.1-201ENST00000603860 190 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 CTHRC1P1-201ENST00000605383 469 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 MIR6886-201ENST00000619864 61 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 SNORD98-201ENST00000636377 67 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 U4.7-201ENST00000638126 106 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.52□□□□□ -2.33
CDC42SE1Q9NRR8 AC008163.1-202ENST00000636004 2889 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 MIR449A-201ENST00000362113 91 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 Y_RNA.97-201ENST00000363094 102 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-105P-201ENST00000363909 104 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-331P-201ENST00000384724 107 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 MIR19B1-201ENST00000384829 87 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU2-7P-201ENST00000410794 178 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU4-53P-201ENST00000410828 140 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms