Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.34□□□□□ -1.87
A1CFQ9NQ94 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.34□□□□□ -1.87
A1CFQ9NQ94 AC096644.4-201ENST00000563417 2912 ntBASIC3.34□□□□□ -1.87
A1CFQ9NQ94 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 SNORD62.1-201ENST00000362541 86 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 SNORA9.2-201ENST00000365361 133 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 Y_RNA.482-201ENST00000384377 111 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RNU6-1297P-201ENST00000384415 104 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RNU6-1304P-201ENST00000411374 106 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RPL21P40-201ENST00000428586 483 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 HMGN2P10-201ENST00000448085 265 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RNU7-187P-201ENST00000458985 68 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RNU7-23P-201ENST00000459465 62 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RNU6-377P-201ENST00000515965 102 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 RNU1-54P-201ENST00000517181 120 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 IMMP1LP2-201ENST00000552954 492 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC103996.1-201ENST00000555468 102 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 MIR4319-201ENST00000577285 85 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 MIR3162-201ENST00000581818 82 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC024153.1-201ENST00000603103 365 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 AC011890.2-201ENST00000613393 294 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 MTND4LP32-201ENST00000636111 270 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
A1CFQ9NQ94 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.33□□□□□ -1.88
A1CFQ9NQ94 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 Y_RNA.813-201ENST00000364639 102 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 RNU6-1280P-201ENST00000365211 107 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 RNU6-601P-201ENST00000384540 107 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 RNU6-306P-201ENST00000384617 107 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 RNU6-370P-201ENST00000411008 104 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 RNU6-293P-201ENST00000411259 106 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 SAR1AP4-201ENST00000429225 591 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC236972.2-201ENST00000434979 310 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC018437.1-201ENST00000492214 406 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 RNU6-581P-201ENST00000516214 105 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC109479.2-201ENST00000517842 174 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AP004607.1-201ENST00000524456 203 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC079600.2-201ENST00000550076 130 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC090574.1-201ENST00000623186 233 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC244517.12-201ENST00000623581 663 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC138627.2-201ENST00000624202 601 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.32□□□□□ -1.88
A1CFQ9NQ94 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
A1CFQ9NQ94 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 RNU6-78P-201ENST00000362897 107 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 Y_RNA.151-201ENST00000363566 112 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 Y_RNA.259-201ENST00000364619 101 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 Y_RNA.419-201ENST00000384041 102 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 RNU6-1037P-201ENST00000459571 107 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AK3P2-201ENST00000507976 429 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AC116337.1-201ENST00000509680 687 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AL121821.2-201ENST00000556081 394 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AL050343.2-201ENST00000607338 280 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AC019193.3-201ENST00000609144 554 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AC107871.2-201ENST00000612894 502 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 AL161423.1-201ENST00000613700 262 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 U4.7-201ENST00000638126 106 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
A1CFQ9NQ94 CDC27P3-201ENST00000635418 1910 ntBASIC3.31□□□□□ -1.88
A1CFQ9NQ94 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
A1CFQ9NQ94 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
A1CFQ9NQ94 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
A1CFQ9NQ94 AC062016.1-201ENST00000355719 319 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 RNU6-428P-201ENST00000362942 107 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 RNU1-100P-201ENST00000365255 165 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 Y_RNA.460-201ENST00000384255 102 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 RNA5SP274-201ENST00000410484 108 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 AL030996.1-201ENST00000411430 235 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 AC023141.4-201ENST00000412031 328 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 RPS20P15-201ENST00000412792 311 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 AL117339.3-201ENST00000418733 162 ntBASIC3.3□□□□□ -1.88
A1CFQ9NQ94 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms