Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.2-201ENST00000362330 96 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 RNU6-1040P-201ENST00000383974 107 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 RNU6-748P-201ENST00000384648 107 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 RNA5SP252-201ENST00000391131 119 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 AL590004.1-201ENST00000405321 300 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 AP000275.1-201ENST00000411943 390 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 AC074117.2-201ENST00000417130 397 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 AL365496.1-201ENST00000426885 215 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.6□□□□□ -1.83
VTA1Q9NP79 AL161651.1-201ENST00000440882 223 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 Y_RNA.631-201ENST00000459607 101 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.6□□□□□ -1.83
VTA1Q9NP79 MED28P2-201ENST00000475771 317 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 AC008885.1-201ENST00000514930 301 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 SNORA31.18-201ENST00000517043 134 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.6□□□□□ -1.83
VTA1Q9NP79 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.6□□□□□ -1.83
VTA1Q9NP79 AC109446.1-201ENST00000566172 220 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 UBL5P2-201ENST00000583788 219 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 MIR622-201ENST00000638396 96 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
VTA1Q9NP79 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.6□□□□□ -1.83
VTA1Q9NP79 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 MTND4P27-201ENST00000450813 1354 ntBASIC3.6□□□□□ -1.83
VTA1Q9NP79 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VTA1Q9NP79 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTA1Q9NP79 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VTA1Q9NP79 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNU6-428P-201ENST00000362942 107 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNU6-490P-201ENST00000362985 107 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 SNORA80A-201ENST00000363922 136 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNU6-843P-201ENST00000384454 104 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 Y_RNA.510-201ENST00000384511 114 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 SNORD116-20-201ENST00000384529 92 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 FTH1P15-201ENST00000406984 280 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNA5SP390-201ENST00000410191 113 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 AC011816.1-201ENST00000441346 546 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 FTH1P25-201ENST00000447665 469 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.59□□□□□ -1.83
VTA1Q9NP79 MTCO3P10-201ENST00000455912 772 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNU5F-8P-201ENST00000515941 111 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 RNU6-264P-201ENST00000517134 104 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.59□□□□□ -1.83
VTA1Q9NP79 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
VTA1Q9NP79 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.59□□□□□ -1.84
VTA1Q9NP79 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
VTA1Q9NP79 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VTA1Q9NP79 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTA1Q9NP79 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VTA1Q9NP79 Y_RNA.112-201ENST00000363250 102 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 RNU6-19P-201ENST00000384718 107 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 BTF3L4P2-201ENST00000392798 346 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 MIR548P-201ENST00000408336 84 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 AC023141.4-201ENST00000412031 328 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 PTGES3P4-201ENST00000426243 356 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 AC021205.2-201ENST00000480069 347 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 RPL7P42-201ENST00000481005 679 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 AC096576.1-201ENST00000489014 359 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 RNU5B-3P-201ENST00000516601 115 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 ACA59.2-201ENST00000517061 156 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 CKS1BP7-201ENST00000522230 235 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 MIR4425-201ENST00000580572 84 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 Y_RNA.812-201ENST00000610788 101 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 Y_RNA.784-201ENST00000613803 101 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 Y_RNA.787-201ENST00000616522 101 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 Y_RNA.780-201ENST00000617336 101 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 Y_RNA.801-201ENST00000619005 101 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 XIST_intron.1-201ENST00000619444 68 ntBASIC3.58□□□□□ -1.84
VTA1Q9NP79 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VTA1Q9NP79 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTA1Q9NP79 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VTA1Q9NP79 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTA1Q9NP79 RNU6-858P-201ENST00000362436 107 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 Y_RNA.404-201ENST00000383978 102 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 Y_RNA.422-201ENST00000384054 114 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 RNU6-842P-201ENST00000384269 107 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 MIR521-1-201ENST00000384902 87 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 MIR559-201ENST00000385188 96 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VTA1Q9NP79 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 CST9LP2-201ENST00000437612 320 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 AC107083.1-201ENST00000439643 279 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.57□□□□□ -1.84
VTA1Q9NP79 RNU6-581P-201ENST00000516214 105 ntBASIC3.57□□□□□ -1.84
VTA1Q9NP79 SNRPGP18-201ENST00000553000 214 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms