Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC135776.4-201ENST00000624300 1904 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RNU6-212P-201ENST00000362642 104 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RNU1-35P-201ENST00000362782 153 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 SNORD32A-201ENST00000364805 84 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RNU6-43P-201ENST00000384302 107 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1222P-201ENST00000384615 107 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 MIR181A2-201ENST00000384863 110 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 MIR183-201ENST00000384958 110 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 MIR449B-201ENST00000384995 97 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1245P-201ENST00000411130 106 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC009161.1-201ENST00000417306 376 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC005326.1-201ENST00000429197 123 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RPL32P28-201ENST00000443577 397 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AMD1P1-201ENST00000457220 922 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1037P-201ENST00000459571 107 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC117440.1-201ENST00000474107 571 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AL121594.1-201ENST00000475906 575 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC090525.1-201ENST00000479116 478 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 TRBVA-201ENST00000498804 316 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AF213884.2-201ENST00000510417 903 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC023824.2-201ENST00000566185 400 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AL713866.2-201ENST00000603579 219 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC090115.4-201ENST00000609970 188 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC012314.7-201ENST00000619693 93 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC007792.1-201ENST00000623023 402 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 MTND4P23-201ENST00000447723 1363 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC000403.1-201ENST00000613696 3585 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1285P-201ENST00000363480 105 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RNA5SP125-201ENST00000364843 120 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1283P-201ENST00000365314 105 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RNU6-128P-201ENST00000383976 107 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 SNORA32.2-201ENST00000384049 122 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AL356776.1-201ENST00000406574 447 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 CYCSP48-201ENST00000417124 323 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 UBE2V1P4-201ENST00000425374 344 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RPS15AP10-201ENST00000432472 382 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 MTCO2P30-201ENST00000503662 364 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC018710.1-201ENST00000506509 158 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RNU6-864P-201ENST00000516256 108 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC026371.1-201ENST00000551867 419 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 MIR5194-201ENST00000582634 120 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 MIR3158-1-201ENST00000583596 81 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC091135.1-201ENST00000585943 307 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 RPL30P11-203ENST00000598995 310 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AL356575.1-201ENST00000603008 283 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AP001836.1-201ENST00000604675 523 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 BNIP3P10-201ENST00000605360 577 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 AC006133.1-201ENST00000617106 264 ntBASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CHMP1AQ9HD42 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 RNU6-655P-201ENST00000362858 107 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 Y_RNA.135-201ENST00000363439 95 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 RNA5SP72-201ENST00000364442 117 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 MIR7-3-201ENST00000384898 110 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 MIR592-201ENST00000384959 97 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC003685.2-201ENST00000422795 395 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AL590632.1-201ENST00000424289 371 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 USP9YP28-201ENST00000435142 589 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC091874.1-201ENST00000511402 339 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 SCGB1D5P-201ENST00000515134 247 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AP000889.2-201ENST00000532684 490 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 SCOCP1-201ENST00000554676 349 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC027176.1-201ENST00000560204 514 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC093249.1-201ENST00000567049 203 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 AL160281.1-201ENST00000605307 311 ntBASIC2.43□□□□□ -2.02
CHMP1AQ9HD42 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms