Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.96□□□□□ -2.26
VCX3BQ9H321 MIR4672-201ENST00000583126 81 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.96□□□□□ -2.26
VCX3BQ9H321 AC092140.2-201ENST00000618027 521 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 AL159153.1-201ENST00000619688 317 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 AP002782.1-201ENST00000623107 614 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 RNU6-636P-201ENST00000384598 107 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 RNA5SP390-201ENST00000410191 113 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL031779.1-201ENST00000415663 330 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 RPL22P18-201ENST00000417197 377 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC006366.1-201ENST00000422002 759 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL365400.1-201ENST00000431854 640 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 RPS15AP10-201ENST00000432472 382 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL035666.1-201ENST00000446195 348 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 EXOSC3P1-201ENST00000448649 500 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 RPL30P6-201ENST00000475925 342 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 RPL36AP21-201ENST00000490372 323 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 HSPE1P23-201ENST00000509838 286 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 RNU6-991P-201ENST00000516168 107 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC022616.6-201ENST00000520479 119 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC011979.2-201ENST00000527568 352 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 MIR3937-201ENST00000580135 106 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 MIR548AC-201ENST00000585049 88 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL139022.2-201ENST00000606934 443 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 AL359547.2-201ENST00000615810 418 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 MIR1248-201ENST00000629190 106 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC103706.2-201ENST00000638080 240 ntBASIC0.95□□□□□ -2.26
VCX3BQ9H321 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
VCX3BQ9H321 AC233981.2-201ENST00000611524 1614 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 MIR449A-201ENST00000362113 91 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 Y_RNA.97-201ENST00000363094 102 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 RNU6-23P-201ENST00000363283 107 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 RNU6-384P-201ENST00000364900 104 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 Y_RNA.302-201ENST00000364997 102 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VCX3BQ9H321 USP9YP25-201ENST00000457708 443 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC114982.1-201ENST00000469402 321 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 RNU7-51P-201ENST00000516560 62 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 SNORA43.2-201ENST00000516652 128 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.94□□□□□ -2.26
VCX3BQ9H321 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.94□□□□□ -2.26
VCX3BQ9H321 DEFB131E-202ENST00000602581 683 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC121334.2-201ENST00000605387 271 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.94□□□□□ -2.26
VCX3BQ9H321 OR4G3P-201ENST00000633500 913 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 AC099654.5-201ENST00000636479 350 ntBASIC0.94□□□□□ -2.26
VCX3BQ9H321 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.94□□□□□ -2.26
VCX3BQ9H321 RNU6-160P-201ENST00000384591 107 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 RPS3AP36-201ENST00000398190 775 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 Y_RNA.597-201ENST00000410463 100 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 RPS15AP12-201ENST00000419498 388 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 MTCYBP5-201ENST00000423752 1135 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 CBX3P6-201ENST00000430257 527 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 MTND1P32-201ENST00000433043 938 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC006026.2-201ENST00000457376 180 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.93□□□□□ -2.26
VCX3BQ9H321 MIR3169-201ENST00000578032 83 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC091135.1-201ENST00000585943 307 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 BNIP3P40-201ENST00000596017 556 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC022022.2-201ENST00000602989 360 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AL353778.1-201ENST00000603149 408 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AP002360.4-201ENST00000606980 481 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC012409.4-201ENST00000612923 249 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AL590240.4-201ENST00000616908 390 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AL049777.1-201ENST00000622740 518 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC007792.1-201ENST00000623023 402 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC022513.1-201ENST00000624512 117 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 AC068700.1-201ENST00000565862 3754 ntBASIC0.93□□□□□ -2.26
VCX3BQ9H321 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.92□□□□□ -2.26
VCX3BQ9H321 SNORD56.1-201ENST00000362913 68 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 RNA5SP493-201ENST00000364115 91 ntBASIC0.92□□□□□ -2.26
VCX3BQ9H321 RNU6-157P-201ENST00000383957 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms