Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 MIR7157-201ENST00000635801 60 ntBASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAIPQ9BWF2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 RNU4-50P-201ENST00000364361 141 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 SNORA51.11-201ENST00000384442 131 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 RPS26P42-201ENST00000413485 326 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AL691449.1-201ENST00000426570 421 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AL445584.1-201ENST00000431451 330 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 RN7SL330P-201ENST00000469709 307 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC025554.1-201ENST00000505641 188 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 SLC25A15P5-201ENST00000508033 253 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC022868.1-201ENST00000517767 391 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC040926.1-201ENST00000530195 238 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 MIR4444-1-201ENST00000581696 74 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 MIR3158-1-201ENST00000583596 81 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 MIR4444-2-201ENST00000584390 74 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC012603.1-201ENST00000606424 528 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 MIR4727-201ENST00000622232 55 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AL450472.1-202ENST00000637286 180 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 AC010329.5-201ENST00000623497 2174 ntBASIC4.41□□□□□ -1.7
TRAIPQ9BWF2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRAIPQ9BWF2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRAIPQ9BWF2 RNU6-874P-201ENST00000362390 105 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 Y_RNA.40-201ENST00000362645 93 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RNU6-280P-201ENST00000364145 104 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 Y_RNA.380-201ENST00000365663 111 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 EIF4EP4-201ENST00000424916 578 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AIMP1P2-201ENST00000425294 312 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RPS29P7-201ENST00000439662 171 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RPS3P1-201ENST00000456781 192 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC073901.1-201ENST00000462471 408 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC006483.1-201ENST00000487308 313 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RN7SL271P-201ENST00000487601 295 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RPL29P14-201ENST00000495837 428 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 IGHV3-76-201ENST00000522465 295 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 YPEL5P3-201ENST00000547227 352 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 MIR5685-201ENST00000579080 79 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RPL30P11-203ENST00000598995 310 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AL078605.1-201ENST00000603529 500 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC104695.3-201ENST00000604052 296 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC006133.1-201ENST00000617106 264 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC138305.3-201ENST00000624988 240 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 MAPK10-253ENST00000641010 4072 ntBASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAIPQ9BWF2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 Y_RNA.557-201ENST00000384680 107 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 MIR554-201ENST00000384874 96 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 AL138878.1-201ENST00000405131 347 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 RNA5SP306-201ENST00000411087 107 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 RN7SL601P-201ENST00000471221 293 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 AC006445.1-201ENST00000491925 405 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 RNU6-1114P-201ENST00000516022 107 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 AC007458.1-201ENST00000542812 373 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 AC025627.2-201ENST00000576220 160 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 AL354798.1-201ENST00000622505 329 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 ZNF962P-201ENST00000443465 3140 ntBASIC4.39□□□□□ -1.71
TRAIPQ9BWF2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAIPQ9BWF2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAIPQ9BWF2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms