Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 Y_RNA.592-201ENST00000410274 109 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC098831.1-201ENST00000440661 216 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC107222.1-201ENST00000510899 637 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 RNU6-911P-201ENST00000516523 104 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 RNU6-897P-201ENST00000517135 105 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC109329.1-201ENST00000518744 317 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC023157.2-201ENST00000540596 141 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 NACAP3-201ENST00000552100 481 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 MIR3609-201ENST00000582661 80 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AL390123.1-201ENST00000603216 237 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC011373.1-201ENST00000607270 237 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AF117829.1-206ENST00000621883 3802 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC073346.2-201ENST00000624724 2058 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.19-201ENST00000362462 99 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.376-201ENST00000365638 108 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 RNU6-708P-201ENST00000384217 107 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.483-201ENST00000384380 101 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 MIR518D-201ENST00000385014 87 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 Z98941.1-201ENST00000407764 100 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 MIR1302-6-201ENST00000408466 90 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AC009310.1-201ENST00000414414 451 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AC099548.1-201ENST00000421443 426 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 MTCO3P29-201ENST00000432119 779 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 RPL26P9-201ENST00000457466 433 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 RNU6-1143P-201ENST00000516125 104 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 SNORA43.2-201ENST00000516652 128 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 SNORA40.15-201ENST00000516884 107 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AL590705.4-201ENST00000532209 134 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 HSPE1P20-201ENST00000538133 289 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 KLKP1-201ENST00000595979 403 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AC024153.1-201ENST00000603103 365 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 RNVU1-4-201ENST00000612985 164 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AC002076.2-201ENST00000617362 122 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 MIR6076-201ENST00000617521 113 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 AC073308.1-201ENST00000623696 305 ntBASIC3.39□□□□□ -1.87
NDC1Q9BTX1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NDC1Q9BTX1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AP000560.1-201ENST00000624150 1937 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC010615.1-201ENST00000594254 1764 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.123-201ENST00000363338 102 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RNU6-527P-201ENST00000363425 104 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RNU6-270P-201ENST00000364131 105 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.257-201ENST00000364596 102 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.471-201ENST00000384312 102 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RNVU1-14-201ENST00000384770 164 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 PTMAP5-201ENST00000393073 333 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AL356968.1-201ENST00000416622 474 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC002075.2-201ENST00000425207 252 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AL590664.1-201ENST00000448065 339 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 SNORD127-201ENST00000458892 86 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RNU6-1132P-201ENST00000459214 107 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 RPL23AP49-201ENST00000492925 468 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC010265.1-201ENST00000513509 211 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 SNORA74D-201ENST00000516404 141 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.680-201ENST00000516441 93 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 MIR6134-201ENST00000617606 109 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 MIR7975-201ENST00000619350 68 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC078938.1-201ENST00000620993 318 ntBASIC3.38□□□□□ -1.87
NDC1Q9BTX1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms