Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC074344.1-201ENST00000512823 224 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNU6-507P-201ENST00000516045 100 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MIR4703-201ENST00000577728 79 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MIR548AC-201ENST00000585049 88 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC135507.2-201ENST00000612443 309 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 DUXAP9-208ENST00000622815 614 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC005609.4-201ENST00000625071 447 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 CTSLP2-204ENST00000629029 392 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MTND5P17-201ENST00000418405 1603 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MTND5P6-201ENST00000422338 1798 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU6-552P-201ENST00000362869 119 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 SNORD14B-201ENST00000364533 90 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU6-116P-201ENST00000384042 109 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU6-19P-201ENST00000384718 107 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 MT-TL1-201ENST00000386347 75 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU6-550P-201ENST00000391057 101 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU6-332P-201ENST00000391193 108 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.615-201ENST00000410769 117 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.623-201ENST00000411128 95 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC138393.2-201ENST00000414742 246 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 PTGES3P4-201ENST00000426243 356 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC104058.1-201ENST00000448028 297 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 MTND3P16-201ENST00000452205 344 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AL356010.1-201ENST00000456364 102 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AP001324.2-201ENST00000461163 319 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC011005.2-201ENST00000487324 359 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC096576.1-201ENST00000489014 359 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 MTCO2P30-201ENST00000503662 364 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU1-86P-201ENST00000516108 154 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU6-358P-201ENST00000516564 75 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RNU1-107P-201ENST00000516617 154 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 ACA59.2-201ENST00000517061 156 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 COX6CP5-201ENST00000527162 228 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 RANP3-201ENST00000530970 276 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AL512310.1-201ENST00000548639 172 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 EIF4BP1-201ENST00000554881 351 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 MIR548S-201ENST00000581352 82 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 MIR3117-201ENST00000584034 78 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC073539.2-201ENST00000597113 165 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AL162413.1-201ENST00000603198 110 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AP001486.3-201ENST00000615334 372 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC099654.14-201ENST00000638599 341 ntBASIC2.01□□□□□ -2.09
EBF4Q9BQW3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.01□□□□□ -2.09
EBF4Q9BQW3 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
EBF4Q9BQW3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
EBF4Q9BQW3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
EBF4Q9BQW3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-7-201ENST00000364784 107 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-1280P-201ENST00000365211 107 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-8-201ENST00000365467 107 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-38P-201ENST00000384085 107 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-1179P-201ENST00000384667 107 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-876P-201ENST00000391295 104 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 AL355497.1-201ENST00000406262 551 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 FTH1P15-201ENST00000406984 280 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 OR6C66P-201ENST00000414917 930 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RPL21P90-201ENST00000415692 466 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2□□□□□ -2.09
EBF4Q9BQW3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2□□□□□ -2.09
EBF4Q9BQW3 BTF3P15-201ENST00000455606 336 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU7-182P-201ENST00000459009 62 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU6-333P-201ENST00000459117 107 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RNU7-180P-201ENST00000459240 63 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 snoU109.2-201ENST00000459316 135 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2□□□□□ -2.09
EBF4Q9BQW3 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2□□□□□ -2.09
EBF4Q9BQW3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2□□□□□ -2.09
EBF4Q9BQW3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2□□□□□ -2.09
EBF4Q9BQW3 MIR4424-201ENST00000585257 86 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 AL031601.2-202ENST00000622650 282 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 AC004944.1-201ENST00000517807 3059 ntBASIC2□□□□□ -2.09
EBF4Q9BQW3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2□□□□□ -2.09
EBF4Q9BQW3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 MTND4P14-201ENST00000435799 1354 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 MIR412-201ENST00000362142 91 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.70-201ENST00000362886 110 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.86-201ENST00000363020 111 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNU6-867P-201ENST00000364956 107 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNU6-877P-201ENST00000383868 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms