Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC009541.1-201ENST00000438279 2662 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NPAS1Q99742 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS1Q99742 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS1Q99742 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS1Q99742 RNU4-79P-201ENST00000362764 141 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RNU6-227P-201ENST00000362865 103 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 Y_RNA.333-201ENST00000365274 102 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RNU6-692P-201ENST00000384496 107 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 SNORA75.4-201ENST00000391278 119 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RPS29P13-201ENST00000402041 169 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS1Q99742 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.88□□□□□ -1.95
NPAS1Q99742 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS1Q99742 FTH1P25-201ENST00000447665 469 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RPL27AP5-201ENST00000469428 449 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RPL31P41-201ENST00000477967 372 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 RPL36AP48-201ENST00000485521 314 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS1Q99742 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS1Q99742 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS1Q99742 RNU5B-3P-201ENST00000516601 115 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.88□□□□□ -1.95
NPAS1Q99742 UBL5P2-201ENST00000583788 219 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC009229.3-201ENST00000608056 282 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC005046.1-201ENST00000608515 625 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AL133215.3-201ENST00000609801 448 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC126177.8-201ENST00000618339 1015 ntBASIC2.88□□□□□ -1.95
NPAS1Q99742 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.88□□□□□ -1.95
NPAS1Q99742 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS1Q99742 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
NPAS1Q99742 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NPAS1Q99742 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.87□□□□□ -1.95
NPAS1Q99742 Y_RNA.11-201ENST00000362375 109 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 RNA5SP374-201ENST00000362939 125 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 SNORD114-19-201ENST00000363072 75 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 U3.13-201ENST00000364804 214 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 SNORD21-201ENST00000383953 95 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NPAS1Q99742 Y_RNA.594-201ENST00000410373 140 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.87□□□□□ -1.95
NPAS1Q99742 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.87□□□□□ -1.95
NPAS1Q99742 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
NPAS1Q99742 AC004383.1-201ENST00000438135 289 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 DAP3P1-201ENST00000441522 278 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC243964.1-201ENST00000441814 261 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 RPL39P29-201ENST00000447779 157 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 Y_RNA.653-201ENST00000459091 95 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 RN7SL863P-201ENST00000462370 296 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC112771.1-201ENST00000463581 102 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 SNORA25.11-201ENST00000515935 105 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC007375.1-201ENST00000554513 578 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.87□□□□□ -1.95
NPAS1Q99742 MIR4765-201ENST00000585007 77 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 VN1R107P-201ENST00000601784 209 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC018462.2-201ENST00000605375 395 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC133104.2-201ENST00000615272 193 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC007792.1-201ENST00000623023 402 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AC090574.1-201ENST00000623186 233 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.87□□□□□ -1.95
NPAS1Q99742 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NPAS1Q99742 HAUS6P2-201ENST00000433254 2404 ntBASIC2.87□□□□□ -1.95
NPAS1Q99742 AP003122.5-201ENST00000527668 3766 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NPAS1Q99742 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPAS1Q99742 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
NPAS1Q99742 RNU6-212P-201ENST00000362642 104 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 Y_RNA.123-201ENST00000363338 102 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 RNU6-1059P-201ENST00000363752 98 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 RNA5SP390-201ENST00000410191 113 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.86□□□□□ -1.95
NPAS1Q99742 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.86□□□□□ -1.95
NPAS1Q99742 RPL7P42-201ENST00000481005 679 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 RPL22P13-201ENST00000493291 347 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AC097462.2-201ENST00000504623 481 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AC110794.1-201ENST00000505816 425 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 RNU6-1213P-201ENST00000517075 94 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AC009812.2-201ENST00000517657 457 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 APOOP3-201ENST00000536787 586 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.86□□□□□ -1.95
NPAS1Q99742 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.86□□□□□ -1.95
NPAS1Q99742 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.86□□□□□ -1.95
NPAS1Q99742 AC109446.1-201ENST00000566172 220 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.86□□□□□ -1.95
NPAS1Q99742 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.86□□□□□ -1.95
NPAS1Q99742 AC011471.1-201ENST00000585766 187 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AP001836.1-201ENST00000604675 523 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 MIR8076-201ENST00000611401 83 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 AC018692.3-201ENST00000623929 123 ntBASIC2.86□□□□□ -1.95
NPAS1Q99742 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPAS1Q99742 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.86□□□□□ -1.95
NPAS1Q99742 MAPK10-322ENST00000641485 4530 ntBASIC2.85□□□□□ -1.95
NPAS1Q99742 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPAS1Q99742 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms