Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 Y_RNA.67-201ENST00000362870 100 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 RNU6-105P-201ENST00000363909 104 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 RNU6-1317P-201ENST00000364582 104 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 MIR517A-201ENST00000385001 87 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AL133475.1-201ENST00000404414 305 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 RN7SKP158-201ENST00000410453 326 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP88Q99567 AC091826.1-201ENST00000514065 313 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 RN7SKP132-201ENST00000516001 208 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 RNU6-559P-201ENST00000516151 98 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP88Q99567 AC093027.1-201ENST00000546698 429 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP88Q99567 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.46□□□□□ -1.86
NUP88Q99567 AL117336.2-201ENST00000602435 335 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AL133393.1-201ENST00000603277 287 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.46□□□□□ -1.86
NUP88Q99567 AL161423.1-201ENST00000613700 262 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AC090617.7-201ENST00000623952 126 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 AL359697.1-201ENST00000624879 587 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NUP88Q99567 AC091564.4-201ENST00000533934 2194 ntBASIC3.46□□□□□ -1.86
NUP88Q99567 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUP88Q99567 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NUP88Q99567 RNU6-748P-201ENST00000384648 107 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 MIR521-1-201ENST00000384902 87 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 AC138623.1-201ENST00000418060 216 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 AC009296.1-201ENST00000443146 155 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.45□□□□□ -1.86
NUP88Q99567 SNRPGP7-201ENST00000469016 106 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 FGF7P4-201ENST00000509595 295 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 MRPS36P2-201ENST00000512569 299 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.45□□□□□ -1.86
NUP88Q99567 CR383656.8-201ENST00000549046 145 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 AC019159.1-201ENST00000605094 187 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 AC124303.1-201ENST00000605703 360 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 AC024581.2-201ENST00000619986 252 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 AC002064.3-201ENST00000623448 346 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NUP88Q99567 AC093908.1-201ENST00000623125 8092 ntBASIC3.45□□□□□ -1.86
NUP88Q99567 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUP88Q99567 RBBP8P1-201ENST00000449447 1844 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 Y_RNA.339-201ENST00000365325 102 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 Y_RNA.387-201ENST00000383918 102 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 RNU6-370P-201ENST00000411008 104 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AC074117.2-201ENST00000417130 397 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AL358075.3-201ENST00000426289 226 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AC236972.1-201ENST00000433225 199 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 FABP5P14-201ENST00000437273 393 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 AC133134.1-201ENST00000466800 359 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AC116337.1-201ENST00000509680 687 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP88Q99567 RNU6-277P-201ENST00000516272 106 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 RNU6-1016P-201ENST00000516689 94 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 SNORA31.18-201ENST00000517043 134 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 RNA5SP380-201ENST00000517190 98 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP88Q99567 GTF3AP2-201ENST00000557014 266 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.44□□□□□ -1.86
NUP88Q99567 POLR3GP2-201ENST00000588366 668 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 PISRT1.1-201ENST00000616930 107 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP88Q99567 AC138627.2-201ENST00000624202 601 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP88Q99567 MAPK10-322ENST00000641485 4530 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUP88Q99567 AC103988.1-201ENST00000566382 2177 ntBASIC3.44□□□□□ -1.86
NUP88Q99567 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP88Q99567 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.43□□□□□ -1.86
NUP88Q99567 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP88Q99567 AC110774.1-201ENST00000623567 2018 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 Y_RNA.58-201ENST00000362807 102 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 Y_RNA.61-201ENST00000362835 102 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 Y_RNA.154-201ENST00000363624 102 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 RNY3P1-201ENST00000365085 102 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 RNY3-201ENST00000365484 102 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 Y_RNA.490-201ENST00000384413 102 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 RNU6-1297P-201ENST00000384415 104 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 SAR1AP2-201ENST00000392696 594 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP88Q99567 AL513475.1-201ENST00000406602 315 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP88Q99567 MTND3P9-201ENST00000429526 346 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP88Q99567 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP88Q99567 AC013470.1-201ENST00000453438 462 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 RN7SL283P-201ENST00000489055 303 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP88Q99567 AC114801.2-201ENST00000503825 781 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.43□□□□□ -1.86
NUP88Q99567 RNU6-612P-201ENST00000516909 102 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 581.8 ms