Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RPL23AP32-201ENST00000395315 459 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 MTND3P20-201ENST00000407663 186 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AC016831.2-201ENST00000417179 352 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 C8orf59P1-201ENST00000429930 303 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 PRPS1P1-201ENST00000445305 876 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AL606517.1-201ENST00000446914 387 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AC003071.1-201ENST00000451219 789 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AL353752.1-201ENST00000454946 260 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 SNRPGP9-201ENST00000456025 225 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 SNRPFP3-201ENST00000457792 225 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 RPS29P1-201ENST00000465274 159 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.74□□□□□ -2.29
LYSMD1Q96S90 HMGB1P30-201ENST00000492455 606 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.74□□□□□ -2.29
LYSMD1Q96S90 RNU6-64P-201ENST00000517119 105 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AC104417.1-201ENST00000523974 751 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 DEFB131D-201ENST00000526803 184 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 MIR4293-201ENST00000584305 78 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LYSMD1Q96S90 AC022513.1-201ENST00000624512 117 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 Y_RNA.597-201ENST00000410463 100 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 EBAG9P1-201ENST00000418955 543 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 HSPE1P9-201ENST00000440046 311 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 NEFMP1-201ENST00000443423 1006 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 RNA5SP269-201ENST00000459032 137 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AL163195.1-201ENST00000496941 348 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AL512347.1-201ENST00000566420 503 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AC025678.1-201ENST00000567861 338 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 MIR3912-201ENST00000577566 105 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AL358072.1-201ENST00000604156 575 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 RPL21P136-201ENST00000605378 396 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AC090186.1-201ENST00000605991 572 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AL020996.3-201ENST00000606617 222 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AC023158.2-201ENST00000614876 543 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AC120349.3-201ENST00000624377 529 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 AC095038.3-201ENST00000634439 195 ntBASIC0.73□□□□□ -2.29
LYSMD1Q96S90 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.73□□□□□ -2.29
LYSMD1Q96S90 LINC02555-201ENST00000563933 1951 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 snoU2_19.1-201ENST00000362361 80 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RNU6-212P-201ENST00000362642 104 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RPL21P1-201ENST00000399532 476 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AL161935.2-201ENST00000414627 60 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC013410.2-201ENST00000422627 201 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 SNRPEP7-201ENST00000438350 220 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC132479.1-201ENST00000449160 144 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AL353718.1-201ENST00000451028 517 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RNU1-131P-201ENST00000458943 161 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RNU6-333P-201ENST00000459117 107 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RNU6-953P-201ENST00000459154 107 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC112198.4-201ENST00000515450 351 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 SNORA3.4-201ENST00000515969 96 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RNA5SP384-201ENST00000516615 116 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 MTND1P36-201ENST00000522384 936 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC011604.1-201ENST00000545978 196 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 CR383656.8-201ENST00000549046 145 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 HMGB1P33-201ENST00000563485 527 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 MTCYBP33-201ENST00000575007 1130 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC015688.6-201ENST00000577737 104 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC078795.2-201ENST00000602835 1252 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC022022.2-201ENST00000602989 360 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AL391646.1-201ENST00000603860 190 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 BX284668.6-201ENST00000606899 438 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 MIR6788-201ENST00000618842 66 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC093875.1-201ENST00000623688 504 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 AC009033.1-201ENST00000624279 431 ntBASIC0.72□□□□□ -2.29
LYSMD1Q96S90 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
LYSMD1Q96S90 RNU6-777P-201ENST00000364265 104 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 RNU6-701P-201ENST00000384059 107 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.71□□□□□ -2.3
LYSMD1Q96S90 RNU6-1025P-201ENST00000410629 104 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
LYSMD1Q96S90 TIMM9P2-201ENST00000419324 266 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms