Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB40CQ96S21 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB40CQ96S21 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB40CQ96S21 RPL30P11-203ENST00000598995 310 ntBASIC2.12□□□□□ -2.07
RAB40CQ96S21 AL713866.2-201ENST00000603579 219 ntBASIC2.12□□□□□ -2.07
RAB40CQ96S21 AC008121.3-201ENST00000618726 433 ntBASIC2.12□□□□□ -2.07
RAB40CQ96S21 AC007792.1-201ENST00000623023 402 ntBASIC2.12□□□□□ -2.07
RAB40CQ96S21 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
RAB40CQ96S21 AC068137.3-201ENST00000639191 341 ntBASIC2.12□□□□□ -2.07
RAB40CQ96S21 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
RAB40CQ96S21 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RAB40CQ96S21 Y_RNA.40-201ENST00000362645 93 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 RNU6-655P-201ENST00000362858 107 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 RNU6-529P-201ENST00000363383 104 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 MIR95-201ENST00000385072 81 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 Z92545.1-201ENST00000411782 234 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC096664.2-201ENST00000411843 406 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AL117339.3-201ENST00000418733 162 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 CR769767.1-201ENST00000436337 346 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC011816.1-201ENST00000441346 546 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC013470.1-201ENST00000453438 462 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 Y_RNA.654-201ENST00000497848 106 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 SNORD60.2-201ENST00000516883 86 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 RNA5SP402-201ENST00000517148 110 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 COPS8P3-201ENST00000526024 482 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AL157687.1-201ENST00000554853 619 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC093249.1-201ENST00000567049 203 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 MYL12BP1-201ENST00000569826 507 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC093732.2-201ENST00000607950 274 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC092807.2-201ENST00000609367 243 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 AC103705.1-201ENST00000619013 241 ntBASIC2.11□□□□□ -2.07
RAB40CQ96S21 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40CQ96S21 OR4G1P-203ENST00000641984 1631 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 Y_RNA.231-201ENST00000364358 102 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU6-336P-201ENST00000364891 107 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 U8.8-201ENST00000365399 135 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU6-827P-201ENST00000365553 106 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU6-1215P-201ENST00000384441 102 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 Y_RNA.516-201ENST00000384541 124 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 SNORA44-201ENST00000384584 132 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 MIR544A-201ENST00000384855 91 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 MIR514A2-201ENST00000385131 88 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 MIR514A3-201ENST00000385132 88 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 SNORA48.2-201ENST00000390926 124 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNA5SP21-201ENST00000410917 96 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU6-293P-201ENST00000411259 106 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 USP9YP27-201ENST00000418455 438 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 ARL5AP1-201ENST00000418991 388 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40CQ96S21 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 RPL39P29-201ENST00000447779 157 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU7-138P-201ENST00000459479 64 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RNU6-1208P-201ENST00000459588 107 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AL121594.1-201ENST00000475906 575 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 RPL38P4-201ENST00000502376 214 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC097462.2-201ENST00000504623 481 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AK3P2-201ENST00000507976 429 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 SNORA48.11-201ENST00000517015 89 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC107304.1-201ENST00000604229 296 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 AC104237.2-201ENST00000612456 443 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 DISC2.1-201ENST00000612827 205 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 FER-210ENST00000628534 558 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40CQ96S21 MIR1321-201ENST00000637766 79 ntBASIC2.1□□□□□ -2.07
RAB40CQ96S21 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RAB40CQ96S21 RNU6-1210P-201ENST00000363775 107 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 RNU6-1090P-201ENST00000364065 94 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 U3.13-201ENST00000364804 214 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 MIR128-1-201ENST00000384921 82 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 MIR561-201ENST00000385216 97 ntBASIC2.09□□□□□ -2.07
RAB40CQ96S21 AL138827.1-201ENST00000402666 306 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms