Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4□□□□□ -1.77
CITED4Q96RK1 HMGN2P20-201ENST00000437531 273 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 AC104332.1-201ENST00000440471 797 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 RPS11P7-201ENST00000442125 465 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 Y_RNA.638-201ENST00000459374 113 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 RPL7P49-201ENST00000471402 708 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 RPS29P26-201ENST00000477483 171 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4□□□□□ -1.77
CITED4Q96RK1 HMGB1P40-201ENST00000525121 540 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4□□□□□ -1.77
CITED4Q96RK1 TVP23BP1-201ENST00000557500 617 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 RPL10P14-201ENST00000565265 298 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 CYP4A43P-201ENST00000568156 121 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4□□□□□ -1.77
CITED4Q96RK1 MIR4474-201ENST00000579189 78 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4□□□□□ -1.77
CITED4Q96RK1 AC090517.3-201ENST00000625170 141 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CITED4Q96RK1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4□□□□□ -1.77
CITED4Q96RK1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CITED4Q96RK1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CITED4Q96RK1 AC026241.1-201ENST00000517873 2142 ntBASIC4□□□□□ -1.77
CITED4Q96RK1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AL359854.1-201ENST00000614203 1594 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CITED4Q96RK1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CITED4Q96RK1 RNU4-80P-201ENST00000363200 141 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 RNU1-106P-201ENST00000384382 164 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 SNORA12-201ENST00000391162 147 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC093162.1-201ENST00000419682 124 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC024067.1-201ENST00000426199 223 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC087441.2-201ENST00000529141 262 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC079598.5-201ENST00000547460 117 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 TGIF1P1-201ENST00000558095 802 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 AC008739.2-201ENST00000597006 317 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 Z83818.1-201ENST00000603584 150 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 SNORD11B-201ENST00000607707 90 ntBASIC3.99□□□□□ -1.77
CITED4Q96RK1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CITED4Q96RK1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CITED4Q96RK1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CITED4Q96RK1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.99□□□□□ -1.77
CITED4Q96RK1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CITED4Q96RK1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CITED4Q96RK1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 UBE2WP1-201ENST00000362030 340 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 RNU6-1020P-201ENST00000363684 107 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 RNU1-32P-201ENST00000363937 159 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 RNU6-886P-201ENST00000384319 105 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 Z74021.1-201ENST00000423610 407 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 AC009414.1-201ENST00000427200 443 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 AL691482.1-201ENST00000453255 87 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 RPL31P41-201ENST00000477967 372 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 RNA5SP373-201ENST00000517271 95 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 CBX3P4-201ENST00000538909 354 ntBASIC3.98□□□□□ -1.77
CITED4Q96RK1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CITED4Q96RK1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.98□□□□□ -1.77
CITED4Q96RK1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CITED4Q96RK1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CITED4Q96RK1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CITED4Q96RK1 RNA5SP197-201ENST00000363357 119 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 Y_RNA.180-201ENST00000363867 113 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 RNU1-43P-201ENST00000365052 165 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 RNU2-54P-201ENST00000410299 190 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 Y_RNA.597-201ENST00000410463 100 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 COX6CP10-201ENST00000416832 224 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 RPL7AP25-201ENST00000423357 805 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 AL445584.1-201ENST00000431451 330 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 AL358232.1-201ENST00000448030 501 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 AC091179.1-201ENST00000461606 579 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 AC006463.2-201ENST00000473326 348 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 RN7SL441P-201ENST00000492388 296 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.97□□□□□ -1.77
CITED4Q96RK1 AC133555.2-201ENST00000550213 292 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 AC022655.2-201ENST00000577280 318 ntBASIC3.97□□□□□ -1.77
CITED4Q96RK1 MIR4480-201ENST00000582492 71 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms