Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL691447.3-201ENST00000635020 330 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
SNX18Q96RF0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNX18Q96RF0 AL353746.1-201ENST00000566293 6881 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 RNY1P16-201ENST00000363063 111 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 Y_RNA.133-201ENST00000363428 110 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 RNU1-115P-201ENST00000365329 160 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 MIR518D-201ENST00000385014 87 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 AL591034.2-201ENST00000402839 359 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 NUP35P1-201ENST00000422734 947 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX18Q96RF0 AC099799.1-201ENST00000439809 192 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX18Q96RF0 MTATP8P1-201ENST00000467115 207 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 RN7SL293P-201ENST00000481765 281 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX18Q96RF0 RNU6-612P-201ENST00000516909 102 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNX18Q96RF0 AP004607.1-201ENST00000524456 203 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 AL391261.3-201ENST00000557194 520 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX18Q96RF0 AC004832.5-201ENST00000608677 401 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 U6.105-201ENST00000637379 88 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 U4.7-201ENST00000638126 106 ntBASIC3.1□□□□□ -1.91
SNX18Q96RF0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX18Q96RF0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNX18Q96RF0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC005592.1-201ENST00000566527 1640 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 RNU6-336P-201ENST00000364891 107 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 MIR183-201ENST00000384958 110 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 RPS3AP12-201ENST00000443616 753 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 RPS26P21-201ENST00000475397 348 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC015911.1-201ENST00000495111 156 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC074250.1-201ENST00000511117 192 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 RNU4-77P-201ENST00000516692 156 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC006557.5-201ENST00000603126 811 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC005046.1-201ENST00000608515 625 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 MIR8076-201ENST00000611401 83 ntBASIC3.09□□□□□ -1.91
SNX18Q96RF0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX18Q96RF0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SNX18Q96RF0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.92
SNX18Q96RF0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SNX18Q96RF0 AC093831.2-201ENST00000624393 3427 ntBASIC3.09□□□□□ -1.92
SNX18Q96RF0 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.92
SNX18Q96RF0 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.92
SNX18Q96RF0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX18Q96RF0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 RNY3P11-201ENST00000364153 102 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 RNU6-574P-201ENST00000384265 107 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 Y_RNA.645-201ENST00000391229 102 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 RNU2-23P-201ENST00000410545 195 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 RN7SKP58-201ENST00000411010 305 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AL353752.1-201ENST00000454946 260 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC116655.1-201ENST00000508324 901 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC010186.2-204ENST00000537668 439 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 AL451007.1-201ENST00000595491 289 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC104695.3-201ENST00000604052 296 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 SNORD58B-201ENST00000607313 66 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC096577.2-201ENST00000611455 153 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 MIR6134-201ENST00000617606 109 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms