Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC004908.3-201ENST00000610248 625 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AL133173.2-201ENST00000614270 90 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 RMST_4.1-201ENST00000616886 107 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AL132822.1-201ENST00000617063 513 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC026585.1-201ENST00000619582 524 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 AC079248.2-201ENST00000623779 326 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
RPRD1AQ96P16 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 RNU6-78P-201ENST00000362897 107 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 SNORD115-3-201ENST00000363100 82 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 RNU6-553P-201ENST00000364047 96 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 C1DP2-201ENST00000418167 426 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 CYCSP49-201ENST00000420810 319 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 MTCYBP1-201ENST00000454315 1119 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AC006026.2-201ENST00000457376 180 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 BZW1P2-201ENST00000473537 826 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 RPL30P12-201ENST00000474666 353 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 RNU6-232P-201ENST00000517144 64 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.82□□□□□ -2.12
RPRD1AQ96P16 DEFB122-202ENST00000569013 197 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AL078605.1-201ENST00000603529 500 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AL670379.2-201ENST00000604983 252 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AL359314.1-201ENST00000616913 261 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 AL159153.1-201ENST00000619688 317 ntBASIC1.82□□□□□ -2.12
RPRD1AQ96P16 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RNY4P34-201ENST00000364779 95 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 SNORD115-7-201ENST00000365306 82 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RNU6-546P-201ENST00000383991 107 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AL031577.2-201ENST00000404133 280 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RNU2-3P-201ENST00000410144 191 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RNU6-387P-201ENST00000411331 105 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RPS3AP3-201ENST00000411933 242 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AL645568.3-201ENST00000433683 316 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AC073614.1-201ENST00000438690 650 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 MTND1P30-201ENST00000441241 901 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 PRELID3BP1-201ENST00000457142 540 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 snoU13.23-201ENST00000458863 104 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.81□□□□□ -2.12
RPRD1AQ96P16 MTCYBP40-201ENST00000509390 1135 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RN7SKP287-201ENST00000516546 266 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 Vault.3-201ENST00000516676 95 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 RN7SKP256-201ENST00000517201 314 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.81□□□□□ -2.12
RPRD1AQ96P16 MIR5692A1-201ENST00000580523 69 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 MIR4524B-201ENST00000581569 115 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 BNIP3P8-201ENST00000597863 560 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AC093424.1-201ENST00000604999 338 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AC091834.1-201ENST00000614543 472 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AC138649.3-201ENST00000622154 254 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 AF246928.1-201ENST00000623768 87 ntBASIC1.81□□□□□ -2.12
RPRD1AQ96P16 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 snoU2_19.1-201ENST00000362361 80 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 RAP1BP3-201ENST00000407180 549 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 RNU6-195P-201ENST00000411352 109 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 OR9R1P-201ENST00000412200 877 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 BTF3L4P1-201ENST00000413813 468 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 USP9YP18-201ENST00000425912 695 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 MTND5P25-201ENST00000430499 799 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AC087884.1-201ENST00000469738 328 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 RNU6-965P-201ENST00000516721 96 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AP002453.2-201ENST00000533503 320 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AC022616.8-201ENST00000533569 253 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 AL603839.4-201ENST00000624658 1005 ntBASIC1.8□□□□□ -2.12
RPRD1AQ96P16 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.8□□□□□ -2.12
RPRD1AQ96P16 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 Y_RNA.367-201ENST00000365544 101 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 RNU6-611P-201ENST00000384276 104 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 SNORA8-201ENST00000384574 139 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 RNU6-607P-201ENST00000411283 108 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 CYCSP33-201ENST00000414485 327 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 AC007969.2-201ENST00000441891 191 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 AC104806.1-201ENST00000508720 308 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms