Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL161935.2-201ENST00000414627 60 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 MTND4P3-201ENST00000417829 541 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 PRPS1P1-201ENST00000445305 876 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 PGBD4P5-201ENST00000445958 426 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC42Q96M95 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 AL139824.2-201ENST00000458731 1095 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 AC113347.3-201ENST00000509113 148 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 AC008837.2-201ENST00000513076 418 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 SNORD116-28-201ENST00000516123 91 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 RNU6-677P-201ENST00000516914 101 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 AP003355.1-201ENST00000518956 587 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 CBX3P8-201ENST00000532412 525 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC42Q96M95 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC42Q96M95 AP000942.3-201ENST00000603702 160 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.27
CCDC42Q96M95 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC42Q96M95 RNU6-1065P-201ENST00000384513 106 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 RNU6-482P-201ENST00000391068 107 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 EBAG9P1-201ENST00000418955 543 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 AC013262.1-201ENST00000426710 252 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 USP9YP11-201ENST00000427537 717 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC42Q96M95 RPS27AP8-201ENST00000452665 445 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 snoU109.2-201ENST00000459316 135 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 AC114982.1-201ENST00000469402 321 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 AC097473.1-201ENST00000508142 408 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC42Q96M95 MIR4524B-201ENST00000581569 115 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC42Q96M95 MIR8065-201ENST00000620577 100 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC42Q96M95 AC099654.5-201ENST00000636479 350 ntBASIC0.89□□□□□ -2.27
CCDC42Q96M95 Y_RNA.327-201ENST00000365201 102 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 SMIM11P1-201ENST00000369586 178 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 RNU6-968P-201ENST00000384076 107 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 MIR520A-201ENST00000384862 85 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 RN7SKP61-201ENST00000410642 295 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.88□□□□□ -2.27
CCDC42Q96M95 MTCYBP5-201ENST00000423752 1135 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AL627311.1-201ENST00000431514 115 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 CALM1P1-201ENST00000442082 433 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 RNA5SP269-201ENST00000459032 137 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AL163540.1-201ENST00000485382 386 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AC103851.1-201ENST00000506833 274 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AC112198.4-201ENST00000515450 351 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 RNU6-1092P-201ENST00000516955 87 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AP000907.2-201ENST00000530827 353 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC42Q96M95 BNIP3P26-201ENST00000600827 554 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC42Q96M95 AL158163.2-201ENST00000619110 700 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AC009033.1-201ENST00000624279 431 ntBASIC0.88□□□□□ -2.27
CCDC42Q96M95 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC42Q96M95 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC42Q96M95 RNU6-224P-201ENST00000384055 107 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC069282.1-201ENST00000411911 526 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC42Q96M95 AL590556.1-201ENST00000423231 483 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.87□□□□□ -2.27
CCDC42Q96M95 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC42Q96M95 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC42Q96M95 ARL2BPP4-201ENST00000506854 471 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 RNA5SP490-201ENST00000517141 136 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC42Q96M95 HMGB1P33-201ENST00000563485 527 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AP005136.1-201ENST00000579765 429 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC174048.1-201ENST00000603389 144 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AL355816.2-201ENST00000610049 647 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC130324.3-201ENST00000614165 542 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AL354696.1-201ENST00000614652 497 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
CCDC42Q96M95 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC42Q96M95 MIR412-201ENST00000362142 91 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 SNORD3E-201ENST00000362899 217 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 Y_RNA.311-201ENST00000365068 96 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC42Q96M95 NDUFB1P2-201ENST00000449477 176 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC093899.1-201ENST00000457984 376 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC134050.1-201ENST00000495088 933 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC42Q96M95 MTCO3P27-201ENST00000514397 196 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC091163.3-201ENST00000518269 1144 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC087894.1-201ENST00000538359 518 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC42Q96M95 AL512310.8-201ENST00000550183 120 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AL391001.1-201ENST00000602747 715 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms