Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 Y_RNA.166-201ENST00000363730 102 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 RNU1-57P-201ENST00000384491 166 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 FO393413.1-201ENST00000402892 195 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 RNU4-47P-201ENST00000410876 114 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 Z92545.1-201ENST00000411782 234 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL139396.1-201ENST00000421137 167 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL590632.1-201ENST00000424289 371 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 RPL30P4-201ENST00000429309 333 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC006028.1-201ENST00000438379 402 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 MTND1P11-201ENST00000456661 876 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC130509.1-201ENST00000464158 433 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 HMGN1P12-201ENST00000499125 195 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC114801.2-201ENST00000503825 781 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 RNU6-612P-201ENST00000516909 102 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL121579.1-201ENST00000555129 305 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 MIR4513-201ENST00000581077 86 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 AL356280.1-201ENST00000603614 379 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AP001836.1-201ENST00000604675 523 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 AC104237.2-201ENST00000612456 443 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
CCDC138Q96M89 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC138Q96M89 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC073346.2-201ENST00000624724 2058 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 RNU6-1317P-201ENST00000364582 104 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 Y_RNA.303-201ENST00000364998 94 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC138Q96M89 RNU6-933P-201ENST00000384424 107 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 MIR186-201ENST00000384988 86 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 AL360182.1-201ENST00000397433 468 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 RNU6-325P-201ENST00000411132 105 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 CYCSP48-201ENST00000417124 323 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC080013.2-201ENST00000460866 323 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC109925.1-201ENST00000478069 331 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 RPL39P5-202ENST00000512505 151 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC027176.1-201ENST00000560204 514 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC005730.3-201ENST00000583067 366 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 AC069294.1-201ENST00000608397 350 ntBASIC3.09□□□□□ -1.91
CCDC138Q96M89 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC138Q96M89 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC138Q96M89 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CCDC138Q96M89 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC138Q96M89 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 RNU6-212P-201ENST00000362642 104 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 RNU6-1141P-201ENST00000364520 107 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC138Q96M89 AP000275.1-201ENST00000411943 390 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 MTND4LP11-201ENST00000422184 280 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 EIF4EP4-201ENST00000424916 578 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 AL445687.1-201ENST00000439946 251 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 PCMTD1P1-201ENST00000455560 355 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 RNU7-187P-201ENST00000458985 68 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 snoU13.14-201ENST00000459372 104 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 RN7SL504P-201ENST00000494496 287 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 Y_RNA.682-201ENST00000516457 100 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 CPDP1-201ENST00000579660 283 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 AC091135.1-201ENST00000585943 307 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 AL159153.1-201ENST00000619688 317 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 AL133216.2-202ENST00000634512 349 ntBASIC3.08□□□□□ -1.92
CCDC138Q96M89 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.08□□□□□ -1.92
CCDC138Q96M89 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC138Q96M89 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC138Q96M89 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC138Q96M89 RNU6-227P-201ENST00000362865 103 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC138Q96M89 RNU6-43P-201ENST00000384302 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms