Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNA5SP281-201ENST00000516504 135 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 LINC00933-203ENST00000559812 219 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 MIR4782-201ENST00000577987 79 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AL160281.1-201ENST00000605307 311 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AC002044.1-201ENST00000606707 158 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AP001330.5-201ENST00000607176 411 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 AC097372.5-201ENST00000623665 376 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 MTND4P1-201ENST00000457501 1466 ntBASIC1.62□□□□□ -2.15
LINC00477Q96M19 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
LINC00477Q96M19 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC00477Q96M19 MTND4P14-201ENST00000435799 1354 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC138393.1-203ENST00000327086 343 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 RNU6-996P-201ENST00000365438 107 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 RNU6-483P-201ENST00000384088 108 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 MIR218-1-201ENST00000384999 110 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 RNU6-607P-201ENST00000411283 108 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 Z98742.2-201ENST00000431564 187 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 AL356010.1-201ENST00000456364 102 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 SCARNA18-201ENST00000459004 134 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 RPL37P6-201ENST00000460682 294 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC117503.1-201ENST00000472241 394 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AP001025.1-201ENST00000486139 332 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 RPL23AP49-201ENST00000492925 468 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC107401.1-201ENST00000503426 685 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC008413.1-201ENST00000511864 177 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC114781.4-201ENST00000513707 639 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 RNA5SP401-201ENST00000515920 127 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 SCARNA16.3-201ENST00000516595 184 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 NACAP3-201ENST00000552100 481 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 TPRKBP2-201ENST00000565969 475 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC008945.2-201ENST00000606056 604 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC004492.1-201ENST00000607036 742 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC00477Q96M19 HULC.1-201ENST00000612720 240 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 MIR3199-2-201ENST00000636243 86 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC068137.4-201ENST00000638485 296 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 AC099654.12-201ENST00000639868 649 ntBASIC1.61□□□□□ -2.15
LINC00477Q96M19 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC00477Q96M19 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LINC00477Q96M19 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC00477Q96M19 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 Y_RNA.40-201ENST00000362645 93 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 U3.12-201ENST00000364498 214 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 RNU1-91P-201ENST00000364746 163 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 Y_RNA.378-201ENST00000365652 113 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 SNORA69-201ENST00000383895 132 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 MIR147B-201ENST00000390185 80 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 RNU6-648P-201ENST00000410190 107 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AL030996.1-201ENST00000411430 235 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AL139413.1-201ENST00000421309 217 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 RNU7-63P-201ENST00000459054 62 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC079382.1-201ENST00000493346 557 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 SNORA25.17-201ENST00000517184 124 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AP001893.2-201ENST00000526949 202 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC105245.1-201ENST00000581934 244 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 MIR5002-201ENST00000584713 97 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.6□□□□□ -2.15
LINC00477Q96M19 AL138889.2-201ENST00000603883 242 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AL355598.1-201ENST00000604169 202 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC087241.4-201ENST00000612441 480 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC015540.1-201ENST00000615828 501 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC005296.1-201ENST00000616145 209 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 AC098657.3-201ENST00000620434 263 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 RMST_7.1-201ENST00000621935 268 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 U6.114-201ENST00000636407 96 ntBASIC1.6□□□□□ -2.15
LINC00477Q96M19 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC00477Q96M19 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC00477Q96M19 MIR412-201ENST00000362142 91 ntBASIC1.59□□□□□ -2.15
LINC00477Q96M19 RNU6-37P-201ENST00000362692 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms