Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RNU6-1088P-201ENST00000516850 104 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX27Q96L92 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX27Q96L92 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX27Q96L92 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX27Q96L92 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX27Q96L92 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX27Q96L92 uc_338.5-201ENST00000611839 155 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 AC011890.2-201ENST00000613393 294 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 AL138726.1-201ENST00000614873 333 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 SCARNA4-202ENST00000625402 129 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX27Q96L92 ZNF658B-202ENST00000615961 3375 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNX27Q96L92 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX27Q96L92 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
SNX27Q96L92 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX27Q96L92 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SNX27Q96L92 U8.9-201ENST00000365667 134 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 RNU6-128P-201ENST00000383976 107 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AL356432.1-201ENST00000405809 419 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 RNU2-49P-201ENST00000410666 184 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 SNORD56-201ENST00000413522 71 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX27Q96L92 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 SNRPEP8-201ENST00000442866 260 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC093019.1-201ENST00000443135 252 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX27Q96L92 NIPA2P5-201ENST00000452282 464 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 RPL23AP45-201ENST00000476406 468 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC068781.1-201ENST00000488231 618 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC116655.1-201ENST00000508324 901 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC022634.1-201ENST00000520765 532 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AP004607.1-201ENST00000524456 203 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AP005597.4-201ENST00000526762 229 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC243960.4-201ENST00000600532 288 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC025253.1-201ENST00000613623 543 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 uc_338.15-201ENST00000615470 191 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX27Q96L92 AC243829.7-201ENST00000633081 225 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 CDC27P3-201ENST00000635418 1910 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
SNX27Q96L92 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX27Q96L92 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX27Q96L92 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 Y_RNA.212-201ENST00000364177 102 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 RNU1-100P-201ENST00000365255 165 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 RNU5E-7P-201ENST00000365290 117 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 SNORD116-11-201ENST00000383882 92 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX27Q96L92 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX27Q96L92 AL031274.1-201ENST00000450334 232 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 RPS29P26-201ENST00000477483 171 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC092436.3-201ENST00000511788 257 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 Y_RNA.682-201ENST00000516457 100 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC026371.1-201ENST00000551867 419 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC138761.3-201ENST00000579993 334 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.25□□□□□ -1.89
SNX27Q96L92 AC023043.2-201ENST00000589678 1026 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC005261.5-201ENST00000596280 355 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 AC010378.1-201ENST00000619270 362 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 RMST_7.1-201ENST00000621935 268 ntBASIC3.25□□□□□ -1.89
SNX27Q96L92 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX27Q96L92 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX27Q96L92 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX27Q96L92 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX27Q96L92 GABRG2-229ENST00000641017 3628 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX27Q96L92 RNU6-562P-201ENST00000362731 107 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 RNU1-105P-201ENST00000363470 161 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 Y_RNA.184-201ENST00000363884 108 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 SNORA3.2-201ENST00000408221 125 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 EEF1A1P41-201ENST00000414667 207 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX27Q96L92 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX27Q96L92 AL139132.1-201ENST00000431587 344 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AL161651.1-201ENST00000440882 223 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX27Q96L92 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX27Q96L92 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX27Q96L92 AC008526.1-201ENST00000509149 338 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX27Q96L92 RNU6-566P-201ENST00000516790 107 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AC104576.1-201ENST00000524225 88 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
SNX27Q96L92 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX27Q96L92 DNAJC8P1-201ENST00000554535 372 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AC025281.1-201ENST00000567026 265 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms