Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 AL160314.1-201ENST00000490836 438 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 RNA5SP468-201ENST00000516782 93 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 AL117187.1-201ENST00000555482 181 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 ZNF861P-201ENST00000588126 639 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 NUTF2P8-201ENST00000604593 363 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 AL049641.1-201ENST00000441055 1948 ntBASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PHACTR3Q96KR7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AL359693.1-201ENST00000614959 2407 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 SNORD14B-201ENST00000364533 90 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 MIR517A-201ENST00000385001 87 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 MIR568-201ENST00000385036 95 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 MIR34A-201ENST00000385130 110 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 MIR181B1-201ENST00000385240 110 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AL030996.1-201ENST00000411430 235 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AL096701.2-201ENST00000416920 238 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AC008267.5-201ENST00000424928 265 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AC063976.3-201ENST00000426849 329 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AL356867.1-201ENST00000429623 299 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 RNU6-120P-201ENST00000516077 103 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 RNU6-699P-201ENST00000517081 110 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AC104576.1-201ENST00000524225 88 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 MIR3671-201ENST00000580455 88 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AC006111.3-201ENST00000622137 383 ntBASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.6□□□□□ -1.83
PHACTR3Q96KR7 AP001148.1-201ENST00000624124 2359 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 MIR412-201ENST00000362142 91 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 RNU1-115P-201ENST00000365329 160 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 MIR9-1-201ENST00000385198 89 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 HSPE1P26-201ENST00000405341 275 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 AL160004.2-201ENST00000432935 350 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 AC011816.1-201ENST00000441346 546 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 IPO7P1-201ENST00000442031 636 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 AC113155.1-201ENST00000511141 769 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 SNORA25.10-201ENST00000515926 124 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 RNU6-143P-201ENST00000516942 93 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 OR1M4P-201ENST00000589199 287 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 Z69720.2-201ENST00000624755 279 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 FAM35BP-202ENST00000497389 3337 ntBASIC3.59□□□□□ -1.83
PHACTR3Q96KR7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PHACTR3Q96KR7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PHACTR3Q96KR7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC008568.2-201ENST00000623862 2313 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 MIR449A-201ENST00000362113 91 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 RNU6-50P-201ENST00000362356 103 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 Y_RNA.80-201ENST00000362996 102 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 RNU6-741P-201ENST00000383889 107 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 Y_RNA.645-201ENST00000391229 102 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 SNORA40C-201ENST00000391285 128 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 RNA5SP129-201ENST00000410276 118 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 HMGB1P12-201ENST00000438594 598 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 GSTA11P-201ENST00000452866 669 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 RPL21P104-201ENST00000464143 478 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 TRAV32-201ENST00000553993 340 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 TRAV28-201ENST00000557548 323 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 SUB1P3-201ENST00000564581 315 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC136601.2-201ENST00000604356 474 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.58□□□□□ -1.84
PHACTR3Q96KR7 RPL9P7-201ENST00000330965 580 ntBASIC3.57□□□□□ -1.84
PHACTR3Q96KR7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.57□□□□□ -1.84
PHACTR3Q96KR7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms