Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SNORD116-20-201ENST00000384529 92 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 RN7SKP123-201ENST00000410732 291 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 RPS20P15-201ENST00000412792 311 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 RN7SL633P-201ENST00000488974 297 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 HMGN1P13-201ENST00000505795 138 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 MTCYBP40-201ENST00000509390 1135 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 MRPS36P2-201ENST00000512569 299 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.718-201ENST00000517110 102 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 AC084781.2-201ENST00000615568 161 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 AC097372.5-201ENST00000623665 376 ntBASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.4□□□□□ -1.87
CDK5RAP3Q96JB5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 SNORA71.1-201ENST00000364523 117 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 U8.9-201ENST00000365667 134 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 SNORD116-29-201ENST00000384516 83 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AL358075.3-201ENST00000426289 226 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AC006946.1-201ENST00000429106 328 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 USP9YP30-201ENST00000430729 455 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 RPL27AP5-201ENST00000469428 449 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 RPL31P41-201ENST00000477967 372 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AC008885.1-201ENST00000514930 301 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 MIR5690-201ENST00000583739 73 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AC018462.2-201ENST00000605375 395 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 YPEL5P2-201ENST00000605553 359 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 AL627309.6-201ENST00000606857 840 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 PISRT1.1-201ENST00000616930 107 ntBASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
CDK5RAP3Q96JB5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.431-201ENST00000384086 102 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RNY4P36-201ENST00000391116 96 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 MTCYBP4-201ENST00000401524 249 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-1050P-201ENST00000410388 107 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RN7SKP220-201ENST00000410611 288 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 Z82205.1-201ENST00000428456 297 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AC146507.2-201ENST00000460608 476 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AC026782.1-201ENST00000512952 449 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.708-201ENST00000516950 96 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 ACA59.2-201ENST00000517061 156 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-1213P-201ENST00000517075 94 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AC009812.2-201ENST00000517657 457 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AL133255.1-201ENST00000606374 441 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AL133215.3-201ENST00000609801 448 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AL160413.1-201ENST00000622780 310 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AC004944.1-201ENST00000517807 3059 ntBASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.38□□□□□ -1.87
CDK5RAP3Q96JB5 AC073325.2-201ENST00000339545 159 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-1059P-201ENST00000363752 98 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-1188P-201ENST00000363795 107 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-105P-201ENST00000363909 104 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 SNORA75.4-201ENST00000391278 119 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 SNORA26.7-201ENST00000391288 122 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AL513475.1-201ENST00000406602 315 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.594-201ENST00000410373 140 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AL513477.1-202ENST00000417061 214 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 MTND1P14-201ENST00000427400 950 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC022018.1-201ENST00000430685 241 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AL591043.1-201ENST00000432461 424 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 UBBP3-201ENST00000445497 241 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 Z96811.1-201ENST00000445880 108 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 FTH1P25-201ENST00000447665 469 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC012308.1-201ENST00000451232 178 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RPL30P15-201ENST00000457129 321 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 U8.21-201ENST00000459536 136 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RN7SL75P-201ENST00000461926 281 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.670-201ENST00000516255 105 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 CR383656.8-201ENST00000549046 145 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC012493.2-201ENST00000595083 291 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AP000654.2-201ENST00000605633 586 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 MIR3976-201ENST00000606807 139 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC009229.3-201ENST00000608056 282 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC005046.1-201ENST00000608515 625 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms