Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VMP1Q96GC9 RNU2-40P-201ENST00000410833 196 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 RN7SKP284-201ENST00000411002 343 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 IFNA20P-201ENST00000436840 528 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VMP1Q96GC9 MTND2P29-201ENST00000438595 412 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.22□□□□□ -2.05
VMP1Q96GC9 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 AC109479.2-201ENST00000517842 174 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.22□□□□□ -2.05
VMP1Q96GC9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.22□□□□□ -2.05
VMP1Q96GC9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.22□□□□□ -2.05
VMP1Q96GC9 AC098657.3-201ENST00000620434 263 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 AC009161.2-201ENST00000624626 138 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.22□□□□□ -2.05
VMP1Q96GC9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VMP1Q96GC9 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 RNU6-181P-201ENST00000363225 107 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 RNU6-393P-201ENST00000384475 107 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 RNU11-3P-201ENST00000391111 133 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 BTF3L4P2-201ENST00000392798 346 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC107081.1-201ENST00000414975 361 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC244505.5-201ENST00000443639 207 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 RPL21P99-201ENST00000480369 423 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 RNU6-445P-201ENST00000516949 107 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC067747.1-201ENST00000608026 250 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC072046.2-201ENST00000618366 268 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 YWHAEP7-203ENST00000622054 312 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
VMP1Q96GC9 AC069528.2-201ENST00000624849 1991 ntBASIC2.21□□□□□ -2.06
VMP1Q96GC9 AL354685.2-201ENST00000448218 1447 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VMP1Q96GC9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 RNU6-1303P-201ENST00000364841 107 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 XGY1-201ENST00000381172 446 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 RNU6-434P-201ENST00000384376 107 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 AL356432.1-201ENST00000405809 419 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 MIR1283-2-201ENST00000408621 87 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 BX510359.4-201ENST00000423750 193 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 HMGN2P3-201ENST00000433603 273 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 HMGN2P5-201ENST00000436882 273 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 RPL32P28-201ENST00000443577 397 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 PRPS1P1-201ENST00000445305 876 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 MTND1P27-201ENST00000451117 902 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VMP1Q96GC9 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 AC023050.3-201ENST00000541142 333 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 MIR4703-201ENST00000577728 79 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 AL590808.1-201ENST00000618696 141 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 AC022418.1-201ENST00000624118 445 ntBASIC2.2□□□□□ -2.06
VMP1Q96GC9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VMP1Q96GC9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
VMP1Q96GC9 AL390237.1-201ENST00000404226 1415 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 Y_RNA.480-201ENST00000384364 102 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 RNA5SP212-201ENST00000391223 107 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 RNU4-53P-201ENST00000410828 140 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 RNU6-293P-201ENST00000411259 106 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
VMP1Q96GC9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC243964.1-201ENST00000441814 261 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 GMFBP1-201ENST00000467831 427 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC079140.5-201ENST00000507882 310 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC009646.1-201ENST00000510455 318 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC008413.1-201ENST00000511864 177 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 DUXAP5-201ENST00000529668 529 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AP002963.1-201ENST00000530590 184 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC103987.3-201ENST00000582071 292 ntBASIC2.19□□□□□ -2.06
VMP1Q96GC9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.19□□□□□ -2.06
VMP1Q96GC9 AC046143.2-201ENST00000609789 160 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms