Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Y_RNA.580-201ENST00000391004 95 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 OOSP1P1-201ENST00000423265 274 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 PHBP16-201ENST00000446318 950 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC012308.1-201ENST00000451232 178 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 RPL23AP3-201ENST00000453844 468 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 snoU13.6-201ENST00000458785 104 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC023141.12-201ENST00000512399 199 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 RNU6-581P-201ENST00000516214 105 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 RNU6-62P-201ENST00000516526 102 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 CYCSP23-201ENST00000519781 313 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 CYP4A43P-201ENST00000568156 121 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC022441.3-201ENST00000605737 136 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC023043.4-201ENST00000612081 449 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC068724.3-201ENST00000625906 87 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
IFT43Q96FT9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
IFT43Q96FT9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
IFT43Q96FT9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
IFT43Q96FT9 SNORA31-201ENST00000362607 130 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 RNU6-873P-201ENST00000363833 107 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 Y_RNA.217-201ENST00000364214 105 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
IFT43Q96FT9 SNORA40.19-201ENST00000390846 128 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC024067.1-201ENST00000426199 223 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 HMGN2P10-201ENST00000448085 265 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC005042.3-201ENST00000453230 174 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AP000705.1-201ENST00000454567 350 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 Y_RNA.641-201ENST00000459414 105 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 RPL35AP15-201ENST00000468042 339 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC091167.1-201ENST00000492017 396 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC074133.1-201ENST00000515696 183 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC233702.2-202ENST00000562547 291 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 RPL23AP97-201ENST00000568955 471 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 MIR5692C2-201ENST00000577959 77 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 IPO5P1-202ENST00000600039 287 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AL109809.4-201ENST00000603520 2185 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AL591034.3-201ENST00000605511 685 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AL357075.2-201ENST00000614906 189 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 uc_338.13-201ENST00000618243 179 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
IFT43Q96FT9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
IFT43Q96FT9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
IFT43Q96FT9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.42□□□□□ -1.7
IFT43Q96FT9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
IFT43Q96FT9 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 Y_RNA.343-201ENST00000365354 112 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 SNORA11F-201ENST00000408237 128 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 MIR1911-201ENST00000410783 80 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 RPS26P42-201ENST00000413485 326 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 AC012306.1-201ENST00000423267 114 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.41□□□□□ -1.7
IFT43Q96FT9 AC112220.1-201ENST00000434628 355 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 RPL39P29-201ENST00000447779 157 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 UQCRHP4-201ENST00000471686 272 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 RNU6-479P-201ENST00000516348 105 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.41□□□□□ -1.7
IFT43Q96FT9 AC007224.1-201ENST00000564410 144 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.41□□□□□ -1.7
IFT43Q96FT9 AC113403.1-201ENST00000604910 193 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 AC048347.1-201ENST00000624621 427 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 MIR3653-201ENST00000625572 110 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.41□□□□□ -1.7
IFT43Q96FT9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
IFT43Q96FT9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.41□□□□□ -1.7
IFT43Q96FT9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
IFT43Q96FT9 ZNF204P-201ENST00000416749 2397 ntBASIC4.41□□□□□ -1.7
IFT43Q96FT9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
IFT43Q96FT9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
IFT43Q96FT9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
IFT43Q96FT9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
IFT43Q96FT9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
IFT43Q96FT9 AC073073.2-201ENST00000609827 2578 ntBASIC4.4□□□□□ -1.7
IFT43Q96FT9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
IFT43Q96FT9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 MIR331-201ENST00000362302 94 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 Y_RNA.272-201ENST00000364696 102 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 RNU6-22P-201ENST00000384355 107 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 SNORA26.3-201ENST00000391119 136 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 RPL21P17-201ENST00000397467 475 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 RNA5SP390-201ENST00000410191 113 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 AC138623.1-201ENST00000418060 216 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 RPL26P9-201ENST00000457466 433 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 AC084357.1-201ENST00000473404 255 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 RPS29P20-201ENST00000489592 171 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 MIR2116-201ENST00000517221 80 ntBASIC4.4□□□□□ -1.71
IFT43Q96FT9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.4□□□□□ -1.71
IFT43Q96FT9 AP003730.1-201ENST00000524605 285 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms