Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 snoU109.2-201ENST00000459316 135 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF31Q96EP0 AC093852.1-201ENST00000503587 266 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 AC114801.2-201ENST00000503825 781 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 AC010265.1-201ENST00000513509 211 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 RNU6-612P-201ENST00000516909 102 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 Y_RNA.715-201ENST00000517082 110 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 H3F3AP1-201ENST00000559984 334 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 FTX_3.1-201ENST00000610451 147 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 AL138825.1-201ENST00000618587 192 ntBASIC3.34□□□□□ -1.87
RNF31Q96EP0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF31Q96EP0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF31Q96EP0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF31Q96EP0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF31Q96EP0 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.88
RNF31Q96EP0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 MTND5P9-201ENST00000503854 1755 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 RNU6-874P-201ENST00000362390 105 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 RNU6-778P-201ENST00000363269 103 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 SNORD14.1-201ENST00000365609 90 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 RNA5SP120-201ENST00000410900 112 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 RNA5SP31-201ENST00000411144 127 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 TOMM20P4-201ENST00000427861 435 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 AC005326.1-201ENST00000429197 123 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 MTND3P9-201ENST00000429526 346 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 CYCSP4-201ENST00000429682 331 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 AC084357.1-201ENST00000473404 255 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 AK3P2-201ENST00000507976 429 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 RNU7-4P-201ENST00000516961 62 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 AC040926.1-201ENST00000530195 238 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 AC027309.3-201ENST00000623419 351 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
RNF31Q96EP0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF31Q96EP0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RNF31Q96EP0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF31Q96EP0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.32□□□□□ -1.88
RNF31Q96EP0 RNU1-33P-201ENST00000364249 162 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 RNU6-1222P-201ENST00000384615 107 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 Y_RNA.618-201ENST00000410949 107 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 RN7SKP53-201ENST00000411337 315 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 AL512844.2-201ENST00000433990 593 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 SNORD105B-201ENST00000458770 79 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF31Q96EP0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF31Q96EP0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.32□□□□□ -1.88
RNF31Q96EP0 AC006600.1-201ENST00000572529 153 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 AC005000.2-201ENST00000605468 310 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 AC090425.1-201ENST00000610007 140 ntBASIC3.32□□□□□ -1.88
RNF31Q96EP0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF31Q96EP0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF31Q96EP0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF31Q96EP0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF31Q96EP0 Y_RNA.210-201ENST00000364161 110 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 RNU6-1318P-201ENST00000365389 103 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 RNU6-784P-201ENST00000384330 106 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 MIR625-201ENST00000385047 85 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC073910.1-201ENST00000445047 438 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 RPL30P10-201ENST00000488148 337 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 RN7SL504P-201ENST00000494496 287 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 SCARNA13-201ENST00000516672 275 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF31Q96EP0 VN1R91P-201ENST00000594377 169 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 AL355598.1-201ENST00000604169 202 ntBASIC3.31□□□□□ -1.88
RNF31Q96EP0 RAC1P9-201ENST00000604990 392 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms