Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 RPL7P54-201ENST00000438336 674 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 RPL9P6-201ENST00000492764 598 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 AC018630.3-201ENST00000542637 96 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 OR11H5P-201ENST00000554039 926 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 AC007621.1-201ENST00000604544 437 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 ELOCP5-201ENST00000604924 333 ntBASIC2.37□□□□□ -2.03
VPS33AQ96AX1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.37□□□□□ -2.03
VPS33AQ96AX1 AP000560.1-201ENST00000624150 1937 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 SNORD37.1-201ENST00000390968 65 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AL031274.1-201ENST00000450334 232 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 RNU4-29P-201ENST00000515943 174 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AP000763.2-201ENST00000540641 163 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AL512310.1-201ENST00000548639 172 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AL356157.2-201ENST00000605122 111 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 AL137790.1-201ENST00000634283 177 ntBASIC2.36□□□□□ -2.03
VPS33AQ96AX1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS33AQ96AX1 MIR21-201ENST00000362134 72 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 RNU6-428P-201ENST00000362942 107 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 SNORA69-201ENST00000383895 132 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 MIR128-1-201ENST00000384921 82 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 SNORD23.1-201ENST00000408212 104 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 PSPHP1-201ENST00000450062 261 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AL353752.1-201ENST00000454946 260 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AL122001.1-201ENST00000457027 370 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 RNU7-138P-201ENST00000459479 64 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 MTCO3P38-201ENST00000468910 766 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC022447.4-201ENST00000504053 364 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC091885.1-201ENST00000506658 268 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC096725.1-201ENST00000514266 313 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 SNORA14.1-201ENST00000516113 141 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 CENPUP1-201ENST00000526649 1202 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC087241.2-201ENST00000535801 324 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC068792.1-201ENST00000621354 417 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
VPS33AQ96AX1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
VPS33AQ96AX1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 Y_RNA.409-201ENST00000383990 98 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 SNORA41-201ENST00000384675 132 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RNA5SP219-201ENST00000390940 113 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RNU2-52P-201ENST00000410680 190 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 MTND1P23-201ENST00000416931 372 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 USP9YP27-201ENST00000418455 438 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RPS15AP10-201ENST00000432472 382 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AL121601.2-201ENST00000438019 707 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RNA5SP401-201ENST00000515920 127 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 SNORA4.4-201ENST00000515921 135 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RNU6-189P-201ENST00000516120 101 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.34□□□□□ -2.03
VPS33AQ96AX1 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 VN1R80P-201ENST00000597126 338 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC018889.1-201ENST00000605372 397 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 RNU6-85P-201ENST00000605989 107 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC103705.1-201ENST00000619013 241 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 AC241585.2-209ENST00000638217 143 ntBASIC2.34□□□□□ -2.03
VPS33AQ96AX1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS33AQ96AX1 AC069528.2-201ENST00000624849 1991 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 U3.13-201ENST00000364804 214 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 RNU6-827P-201ENST00000365553 106 ntBASIC2.33□□□□□ -2.04
VPS33AQ96AX1 RNU6-546P-201ENST00000383991 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms