Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AL031274.1-201ENST00000450334 232 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 RPL23AP45-201ENST00000476406 468 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 RPL23AP70-201ENST00000483361 460 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 HSPE1P20-201ENST00000538133 289 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AL118558.2-201ENST00000556294 238 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AL357078.3-201ENST00000607528 618 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 CTSLP2-204ENST00000629029 392 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 MIR3662-201ENST00000637030 95 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HERVK_113Q902F9 RBBP8P1-201ENST00000449447 1844 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AC121333.1-201ENST00000567488 2709 ntBASIC2.98□□□□□ -1.93
HERVK_113Q902F9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AL161431.1-201ENST00000618966 4205 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 SNORD56.3-201ENST00000363507 71 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 Y_RNA.373-201ENST00000365600 103 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AL513475.1-201ENST00000406602 315 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 SNORD56-201ENST00000413522 71 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC133134.1-201ENST00000466800 359 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 RN7SL633P-201ENST00000488974 297 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 RNU6-548P-201ENST00000517083 115 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC109329.2-201ENST00000519658 482 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 RNU6-323P-201ENST00000521915 107 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AL133241.1-201ENST00000556832 487 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC027176.1-201ENST00000560204 514 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 MIR3199-1-201ENST00000582434 88 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 RPS15AP11-201ENST00000594193 385 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC025754.2-201ENST00000606491 432 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC007014.2-201ENST00000615581 479 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AL449363.1-201ENST00000617815 186 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AL160394.1-201ENST00000624765 724 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 AC024614.3-201ENST00000637860 256 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 U4.7-201ENST00000638126 106 ntBASIC2.97□□□□□ -1.93
HERVK_113Q902F9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERVK_113Q902F9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.93
HERVK_113Q902F9 AL355596.1-201ENST00000565399 3996 ntBASIC2.96□□□□□ -1.93
HERVK_113Q902F9 Z75746.1-201ENST00000440243 2080 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 ZNF72P-201ENST00000425869 1908 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 SNORD56.1-201ENST00000362913 68 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 Y_RNA.100-201ENST00000363141 102 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 Y_RNA.157-201ENST00000363638 102 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AL356057.3-201ENST00000402607 340 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 RNA5SP390-201ENST00000410191 113 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 RNA5SP425-201ENST00000410336 112 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AL135786.1-201ENST00000415892 214 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC074117.2-201ENST00000417130 397 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC097463.2-201ENST00000421074 142 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 MICF-203ENST00000432679 129 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC112771.1-201ENST00000463581 102 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC098799.2-201ENST00000509466 868 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 SMURF2P1-201ENST00000514992 481 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 SCARNA3-201ENST00000517097 143 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 MIR4648-201ENST00000580107 72 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AP000907.4-201ENST00000604143 237 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 AC024581.2-201ENST00000619986 252 ntBASIC2.96□□□□□ -1.94
HERVK_113Q902F9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HERVK_113Q902F9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 Y_RNA.256-201ENST00000364594 104 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 FO393413.1-201ENST00000402892 195 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AL133475.1-201ENST00000404414 305 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 Z98742.3-201ENST00000418637 326 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 RPS15AP10-201ENST00000432472 382 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC007547.1-201ENST00000462177 490 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC018437.1-201ENST00000492214 406 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 TRBVA-201ENST00000498804 316 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC023141.11-201ENST00000508864 202 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 MTCYBP40-201ENST00000509390 1135 ntBASIC2.95□□□□□ -1.94
HERVK_113Q902F9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113Q902F9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms