Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 DEFB131E-202ENST00000602581 683 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 BNIP3P9-201ENST00000603714 553 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AC080013.6-201ENST00000606185 215 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AC110491.1-201ENST00000562191 2010 ntBASIC1.53□□□□□ -2.16
SHROOM3Q8TF72 AC099654.7-201ENST00000635788 2127 ntBASIC1.53□□□□□ -2.17
SHROOM3Q8TF72 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.22-201ENST00000362492 102 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU4-24P-201ENST00000364565 139 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU6-116P-201ENST00000384042 109 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 SNORA75B-201ENST00000384053 137 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 MIR888-201ENST00000401186 77 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AL590002.1-201ENST00000406554 418 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU2-3P-201ENST00000410144 191 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RPL26P27-201ENST00000414397 437 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 CALM2P2-201ENST00000428512 440 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC079448.1-201ENST00000449377 373 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 MTATP6P7-201ENST00000453315 681 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC013267.1-201ENST00000458227 267 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNA5SP269-201ENST00000459032 137 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC026801.1-201ENST00000497178 464 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC109927.2-201ENST00000506416 303 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU6-405P-201ENST00000516637 110 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 SUB1P1-201ENST00000524415 382 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AP003072.2-201ENST00000527756 676 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC174048.1-201ENST00000603389 144 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC008498.1-201ENST00000613012 531 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC025594.3-201ENST00000613068 790 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC011155.2-201ENST00000623202 216 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.1-201ENST00000352915 104 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU6-858P-201ENST00000362436 107 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 Y_RNA.436-201ENST00000384097 102 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU6-1032P-201ENST00000384100 107 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU6-166P-201ENST00000384371 107 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNA5SP354-201ENST00000391247 136 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 MIR548J-201ENST00000408833 112 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 EEF1A1P40-201ENST00000412883 573 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC114491.1-201ENST00000416095 246 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC133104.1-201ENST00000429100 218 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 MTCO3P5-201ENST00000433620 714 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC079781.2-201ENST00000446424 169 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 RNU6-314P-201ENST00000516574 104 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC009902.1-201ENST00000519351 183 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 OR5AL2P-201ENST00000532185 920 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC024909.2-201ENST00000553035 286 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 Z99571.1-201ENST00000636677 394 ntBASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SHROOM3Q8TF72 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RNU6-461P-201ENST00000364195 107 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RNU4-66P-201ENST00000365199 138 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RNU6-1103P-201ENST00000384150 107 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 BX295541.1-201ENST00000417774 250 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 VN1R108P-201ENST00000431580 830 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AL591212.2-201ENST00000433923 257 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AL512844.2-201ENST00000433990 593 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AL353706.1-201ENST00000436728 494 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AL078601.1-201ENST00000444542 271 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 DDX3P2-201ENST00000446138 111 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC132479.1-201ENST00000449160 144 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC012308.1-201ENST00000451232 178 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 MTCO2P18-201ENST00000457151 658 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RPS29P1-201ENST00000465274 159 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RPS27AP10-201ENST00000496103 208 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC113155.1-201ENST00000511141 769 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC105417.1-201ENST00000514691 285 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RNU6-928P-201ENST00000516876 104 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RNU6-677P-201ENST00000516914 101 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AP003392.2-201ENST00000527269 208 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 OR4R1P-201ENST00000529879 463 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AL121821.2-201ENST00000556081 394 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AL356432.3-201ENST00000568952 465 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC009127.3-201ENST00000570531 403 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 MTCYBP33-201ENST00000575007 1130 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 RPS15AP11-201ENST00000594193 385 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AC091805.2-201ENST00000603848 235 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 MIR98-201ENST00000606724 119 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 AP002360.4-201ENST00000606980 481 ntBASIC1.51□□□□□ -2.17
SHROOM3Q8TF72 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms