Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AC007485.1-201ENST00000616755 206 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 AC010680.1-201ENST00000590024 3590 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 U3.6-201ENST00000363622 211 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 MIR521-1-201ENST00000384902 87 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 RNA5SP344-201ENST00000411081 104 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 AL353705.1-201ENST00000433468 480 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 RPL23AP50-201ENST00000434149 455 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 snoU13.28-201ENST00000459235 104 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 SNORA25.10-201ENST00000515926 124 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 SNORD116.3-201ENST00000517176 78 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 AC023442.1-201ENST00000531247 422 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 BNIP3P16-201ENST00000589779 534 ntBASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCHCR1Q8TD31 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 RNU6-227P-201ENST00000362865 103 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 Y_RNA.428-201ENST00000384078 102 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 SNORA11-201ENST00000408789 128 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 RNA5SP44-201ENST00000410446 133 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 NUP35P1-201ENST00000422734 947 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC099799.1-201ENST00000439809 192 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 CYCSP32-201ENST00000440548 321 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC115115.1-201ENST00000449927 248 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC010099.1-201ENST00000455434 375 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 RPL21P10-201ENST00000463521 490 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 Y_RNA.661-201ENST00000516003 99 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 SNORA31.18-201ENST00000517043 134 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 RNU6-1137P-201ENST00000517073 99 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC010186.2-204ENST00000537668 439 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 CR383656.8-201ENST00000549046 145 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC021739.1-201ENST00000559631 174 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AL158827.2-201ENST00000602494 330 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC024220.1-201ENST00000603675 484 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 MIR92B-201ENST00000607575 96 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AL691447.3-201ENST00000635020 330 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 AC093831.2-201ENST00000624393 3427 ntBASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.42□□□□□ -1.86
CCHCR1Q8TD31 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 Y_RNA.48-201ENST00000362710 103 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 SNORD50.1-201ENST00000362987 71 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 Y_RNA.158-201ENST00000363651 101 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 Y_RNA.533-201ENST00000384596 114 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 MRPL42P3-201ENST00000401492 326 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 RNA5SP38-201ENST00000410750 119 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AP000275.1-201ENST00000411943 390 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 MRPS18CP6-201ENST00000423587 223 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 YME1L1P1-201ENST00000429435 297 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 MTND3P9-201ENST00000429526 346 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AL160004.2-201ENST00000432935 350 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 GSTA11P-201ENST00000452866 669 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC116655.1-201ENST00000508324 901 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 HMGN2P15-201ENST00000585707 270 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC020895.1-201ENST00000595362 272 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC009318.2-201ENST00000610917 651 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC006157.1-201ENST00000611750 366 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 AC084757.4-201ENST00000616350 526 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 MTND4P1-201ENST00000457501 1466 ntBASIC3.41□□□□□ -1.86
CCHCR1Q8TD31 MTND5P9-201ENST00000503854 1755 ntBASIC3.4□□□□□ -1.86
CCHCR1Q8TD31 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCHCR1Q8TD31 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CCHCR1Q8TD31 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms