Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC112484.5-201ENST00000624189 228 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AC018555.1-201ENST00000567548 1980 ntBASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NKX2-3Q8TAU0 AL359693.1-201ENST00000614959 2407 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 MIR383-201ENST00000362257 73 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 RNU1-132P-201ENST00000364300 164 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 SNORA20B-201ENST00000384220 132 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-106P-201ENST00000384405 107 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-19P-201ENST00000384718 107 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 MIR200C-201ENST00000384980 68 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 MIR195-201ENST00000385194 87 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 SNORD72-201ENST00000390994 80 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AL606845.1-201ENST00000404881 255 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 RN7SKP53-201ENST00000411337 315 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC096649.2-201ENST00000416186 393 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC091390.3-201ENST00000426478 338 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC006028.1-201ENST00000438379 402 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 RN7SL691P-201ENST00000494487 301 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 SCARNA13-201ENST00000516672 275 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC106871.1-201ENST00000568324 3102 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 OR51H2P-202ENST00000641424 3046 ntBASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-3Q8TAU0 AC068647.1-201ENST00000489539 2265 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 SNORD114-19-201ENST00000363072 75 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-1082P-201ENST00000364574 107 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 SNORD58C-201ENST00000365223 64 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AL512633.1-201ENST00000399931 655 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 U3.37-201ENST00000408528 213 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 RPS20P14-201ENST00000412545 360 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 RPS26P42-201ENST00000413485 326 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AC098614.2-201ENST00000426040 255 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-561P-201ENST00000516222 102 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 SNORD84-203ENST00000584275 78 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AC079587.1-201ENST00000603846 277 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AC024581.2-201ENST00000619986 252 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AC091905.2-201ENST00000623143 306 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 AL356489.2-201ENST00000566968 3528 ntBASIC5.18□□□□□ -1.58
NKX2-3Q8TAU0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 Y_RNA.120-201ENST00000363304 110 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 RNU6-793P-201ENST00000384233 104 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 MT-TT-201ENST00000387460 66 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 Y_RNA.617-201ENST00000410920 90 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 CYCSP19-201ENST00000411715 316 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 Z85995.1-201ENST00000415547 335 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 YPEL5P1-201ENST00000419731 367 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 AC146507.2-201ENST00000460608 476 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 RPL35AP15-201ENST00000468042 339 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 RPL23AP70-201ENST00000483361 460 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 AC093591.2-201ENST00000565254 3843 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 RPL23AP97-201ENST00000568955 471 ntBASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NKX2-3Q8TAU0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms