Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 BNIP3P6-201ENST00000549284 499 ntBASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AL354943.1-201ENST00000572103 781 ntBASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AC137800.2-201ENST00000574375 120 ntBASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AL136363.2-201ENST00000604173 851 ntBASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 AL158032.1-201ENST00000605401 106 ntBASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 OR4G3P-201ENST00000633500 913 ntBASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CCDC148Q8NFR7 ZNF29P-201ENST00000225587 168 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AL391994.1-201ENST00000254724 282 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 RNU6-384P-201ENST00000364900 104 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AL031779.1-201ENST00000415663 330 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 VN1R108P-201ENST00000431580 830 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 RPS15AP10-201ENST00000432472 382 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AL357134.1-201ENST00000445848 426 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AL035666.1-201ENST00000446195 348 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AC093259.1-201ENST00000509755 300 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 RNU6-965P-201ENST00000516721 96 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 RNU1-92P-201ENST00000517017 135 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 MTND4LP18-201ENST00000526864 291 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 MIR4999-201ENST00000585029 91 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AP000942.3-201ENST00000603702 160 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AL031281.1-201ENST00000604049 488 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AL359999.1-201ENST00000604513 294 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 AC092106.3-201ENST00000611308 722 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
CCDC148Q8NFR7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC148Q8NFR7 snoU2_19.1-201ENST00000362361 80 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 MIR578-201ENST00000384828 96 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 RPS3AP36-201ENST00000398190 775 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AC108078.2-201ENST00000510750 236 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AP005597.4-201ENST00000526762 229 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 TRAV32-201ENST00000553993 340 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 DEFB131E-202ENST00000602581 683 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AC078795.2-201ENST00000602835 1252 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 AC022022.2-201ENST00000602989 360 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 RMST_7.1-201ENST00000621935 268 ntBASIC1.58□□□□□ -2.16
CCDC148Q8NFR7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 SNORA62.1-201ENST00000364287 154 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RNU6-1200P-201ENST00000384162 107 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RNA5SP100-201ENST00000410903 110 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RNA5SP59-201ENST00000410922 110 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RNU6-333P-201ENST00000459117 107 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RN7SKP210-201ENST00000459176 261 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 MTND2P33-201ENST00000506452 1031 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 RNU6-123P-201ENST00000516163 102 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 COPS8P3-201ENST00000526024 482 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 AC091135.1-201ENST00000585943 307 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 AP000811.1-201ENST00000603803 651 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 AP002782.1-201ENST00000623107 614 ntBASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC148Q8NFR7 SNORD56.1-201ENST00000362913 68 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 RNU4-1-201ENST00000363925 141 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 RNU6-160P-201ENST00000384591 107 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 AL590556.1-201ENST00000423231 483 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 HMGB1P31-201ENST00000437242 427 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC148Q8NFR7 AC091951.3-201ENST00000504093 246 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms